Gene Sama_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0311 
Symbol 
ID4602567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp376741 
End bp377334 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content54% 
IMG OID639779640 
Producthypothetical protein 
Protein accessionYP_926192 
Protein GI119773452 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.95991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGCC GGATGAATGT AATAGCCGAT CCGTTGTGCC AGTGGGTTGG TGAGATCCTC 
GGGCTGGACT TTCACGCCAG CGACAATAGG GATTTACGCC CGACACAGAC AGTTGCGACC
CTAGTGCATG AACAAGGCTC GCTTAAGCAG CTGGATACGG CTTGGGGCAT TAAGCCAGCC
TGGGCGAAGC AGATCCTTAT CAATGCACAG GCTGAAACCG TCATGCAAAA GCCAACCTTC
AAACGCGCCT TTTCTGAACA TAGATGCCTG GTGCCCTGCT CAGGCTGGTA CGAATGGCGT
CAGGAGCAAG GCACTGACGG TAGAGAAAAA GGTCGAAAGG TTAAGTACCT CTTCAGCGCC
GCCAACAACA AGCCGTTGTT GATGGCCGGA CTCGTATTCA ACGAACCCAC CGGAGCCAAG
TTGGTTACCC TAACCACAGC CCCGATACCC AGCTGCGCCC CGTACCACAA CCGCATGCCG
CTGTTTATCG ACCCAGACAA CATCGATTTC TGGTTCTGTT CTACGCCAGA ACAGCTTCAG
CCACTGCTGC AAAATGAGCA CAGCTTGGGG ATTTTGGTGG AAGCACAGCA CTGA
 
Protein sequence
MCGRMNVIAD PLCQWVGEIL GLDFHASDNR DLRPTQTVAT LVHEQGSLKQ LDTAWGIKPA 
WAKQILINAQ AETVMQKPTF KRAFSEHRCL VPCSGWYEWR QEQGTDGREK GRKVKYLFSA
ANNKPLLMAG LVFNEPTGAK LVTLTTAPIP SCAPYHNRMP LFIDPDNIDF WFCSTPEQLQ
PLLQNEHSLG ILVEAQH