Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0277 |
Symbol | |
ID | 4602533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 321736 |
End bp | 323187 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639779606 |
Product | hypothetical protein |
Protein accession | YP_926158 |
Protein GI | 119773418 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.532467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAG CATTGCGTGG TCTTGGCTAT ACGACAGCAT CTGCGTTAGC GGACATTATT GACAACAGTA TTGCAGCTAA AGCCAGTCGC GTTGATCTCA ATTTTACTTG GCAGAACGAG AAGAGTCGTA TTGAGATACT GGATAATGGT AGCGGAATGG ATGCACAAGG TCTCGATACG GCAATGAGGC TAGGTGAGCT GAACCCTCTT GATGAACGTG ATGAGTCAGA TCTTGGTCGT TTTGGTATGG GGCTGAAGAC TGCTTCCTTT TCTCAATGTC GCAGCCTGAC AGTTGCCACA ATGCAGAATA ATCAGTTTAA CTGCTTGCGT TGGGATCTTG ATGTACTGGT TGAAAGCTCC GGTGATGGCT GGTTTATGCT GGAAGGGGCG TCAGAGACAG GGCTGCCCTT AGTTGAATCC TTCAAAAAAA TCGGTCATGG AACACTGGTT CTTTGGGAGA AGTTAGATCG CATTCTAACA GATGGTTTTA CTTCAAATGA TTTTCTGGAT TTGATTGATC AGGTTGAACG ACATCTGGCG ATGGTTTTTC ATCGATATCT TGAAGACCAA AGTCAGCGCT TTGAAATTTA CATAAATGAC AACAAGGTAA AACCTTGGGA TCCGTTTATG ACTGGCCATC CGGCTAAATC TTGGAATTCA CCGCTAGCAT CACAGTTGAC TCTGGGGGGA AGCGTCAACG TGGAATGCCA TGTTTTACCT CACAAAGATA GGTTAACAGA TAAAGAGTTT GAGGCAGCTG CTGGACCTGA TGGCTGGACT GCTCAACAAG GATTTTATGT TTATAGAAAC AGAAGAATGT TATTGGCGGG CAGCTGGCTC GGCCTTGGCA AAGCCCGATC TTGGACTAAA GAAGAAGCCC ATAGACTTGC GCGTATTCGG CTGGATATCC CCAATACAGT AGATTCAGAC TGGAAAATCG ATATTCGCAA GGCAACTGCG CGTCCTCCGG TAAAAATGAG AAAGTGGTTA ATGCACTTGG CTGAAGATAC AAGAGCTAGA GCTAGGAAAA CTTTTGCGTC AAGAGGTCGG TCTGCAAGAA CTGGAAACGG CGAGACAGTG GTTCAGGCAT GGCGTGCTGA CCAAACATCA ACAGGTTTAC GTTACAAAGT GGATGATTCG CACCCTGCAA TTAGAGCCGT GTTGGATGAC GCTGGTTCTC TGTTACCGCA GATTAAAGCC ATGCTGAGGA TACTGGAAGA AACCATTCCA GTTCAAAGGA TATGGCTGGA TACAGCAGAA AATAAAGAAA CACCACGTAC CAATTTCGAT GGCGAAGCTC CGTCAGAGGT GATTGAGGTC TTGACCATCA TGTATCAAAA CCTCACAAGC AAAAAAGGCT TCAGTGCTGA AGAGGCAAAA AGAAAACTTC TTCAGACAGA ACCGTTTCAT GACTACCCTC AGTTGGTTGC ATCCCTGACA GACTCGACCT GA
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Protein sequence | MIEALRGLGY TTASALADII DNSIAAKASR VDLNFTWQNE KSRIEILDNG SGMDAQGLDT AMRLGELNPL DERDESDLGR FGMGLKTASF SQCRSLTVAT MQNNQFNCLR WDLDVLVESS GDGWFMLEGA SETGLPLVES FKKIGHGTLV LWEKLDRILT DGFTSNDFLD LIDQVERHLA MVFHRYLEDQ SQRFEIYIND NKVKPWDPFM TGHPAKSWNS PLASQLTLGG SVNVECHVLP HKDRLTDKEF EAAAGPDGWT AQQGFYVYRN RRMLLAGSWL GLGKARSWTK EEAHRLARIR LDIPNTVDSD WKIDIRKATA RPPVKMRKWL MHLAEDTRAR ARKTFASRGR SARTGNGETV VQAWRADQTS TGLRYKVDDS HPAIRAVLDD AGSLLPQIKA MLRILEETIP VQRIWLDTAE NKETPRTNFD GEAPSEVIEV LTIMYQNLTS KKGFSAEEAK RKLLQTEPFH DYPQLVASLT DST
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