Gene Sama_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0275 
Symbol 
ID4602531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp316580 
End bp317083 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content51% 
IMG OID639779604 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_926156 
Protein GI119773416 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR03645] lactoylglutathione lyase family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAT ATCCACGCAG TTTTTCTCAC ATCGGTATTT CTGTGCCCGA TCTTGAGGCC 
GCAGTGAAGT TTTACACCGA GGTACTCGGT TGGTATCTCA TCATGCCGCC CACCGAGATT
GTGGAAGACG ACTCCGCCAT CGGCGAAATG TGTACCGATG TGTTTGGTGC TGGCTGGGAG
CGTTTTCGCA TCGCCCACCT GTCCACCGGT GACCGTATCG GGGTTGAGCT GTTCGAGTTT
AAAAACCAAG AGAACCCGGA AGACAACTTC GAATACTGGA AAACCGGTAT CTTCCATTTC
TGCGTGCAGG ACCCGGATGT GGAAGGCCTG GCCGAGAAAA TCGTTGCCGC CGGTGGTAAA
AAGCGCATGA AGGCCCCGCG CTACTATTAC CCGGGTGAAA AGCCTTACCG CATGATTTAT
ATGGAAGATC CCTTTGGAAA TATCCTTGAG ATTTACAGCC ACAGTTATGA GCTGCACTAT
TCGAGTGGTG CTTATACCGG CTAA
 
Protein sequence
MNTYPRSFSH IGISVPDLEA AVKFYTEVLG WYLIMPPTEI VEDDSAIGEM CTDVFGAGWE 
RFRIAHLSTG DRIGVELFEF KNQENPEDNF EYWKTGIFHF CVQDPDVEGL AEKIVAAGGK
KRMKAPRYYY PGEKPYRMIY MEDPFGNILE IYSHSYELHY SSGAYTG