| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0273 |
|---|
| Symbol | |
|---|
| ID | 4602529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 314648 |
|---|
| End bp | 315343 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639779602 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_926154 |
|---|
| Protein GI | 119773414 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC CTGTGAACAA GACTTTTATT ATCAGCCTGC CCCGAACCGG CACCACCAGT
GTGTGTGTGG CCCTGCTTGA GGCAGCGCCA AGGGCGGGGC TGGCACCACT TAAGGTGGCG
CACATGGCCT TTACCAAGGC GAGCTTTGAG GCCGCCGATG CCATAGCCGA CGCCCCTGTG
TTCAGTGACT ACCAAAAACT GGACAAACTC TACCCCGGCA GTAAGTTTGT TTATCTTGAC
CGCACAATCG ACAGCTGGTT GCCGTCGATG CAAAGGCTGC TCGAGCGCAT GTTGCCAAAG
CTCGACCCTA ACGCCAAAGG TGGTTTTCAC CCGCAGCTGC GGCGCAGTTT TAATGAAGTA
TTTAAGCTGA ATAAGGCTCT GGCAGGCACA GTGGATATGA TGAGCCCCGC GCACCTGGAG
CAATGTTTTA CCCGCCACAG GCAAGGGGTA GATGATTATT TCTGTGGCCG CGACGACTTG
CTTTGCCTTG ACCCCTCAGC CTCGGGGGCT CTGGCGGCGC TGCACCGATT TTTAGGTCTT
GCCGACGTCG CCGAAGACGC CCCTTTTCCG CACCTGAATC AGGCGGGCCG GGTGGCCGGT
TTTGATGAGT TCAAACACCC CAACAAAATC CCCGCCGAGC TGTCGGGCCC TCAGCGACGC
GCCTTTTTCG ACTATGCCGT CAACCGTAAA GGTTGA
|
|---|
| Protein sequence | MSLPVNKTFI ISLPRTGTTS VCVALLEAAP RAGLAPLKVA HMAFTKASFE AADAIADAPV
FSDYQKLDKL YPGSKFVYLD RTIDSWLPSM QRLLERMLPK LDPNAKGGFH PQLRRSFNEV
FKLNKALAGT VDMMSPAHLE QCFTRHRQGV DDYFCGRDDL LCLDPSASGA LAALHRFLGL
ADVAEDAPFP HLNQAGRVAG FDEFKHPNKI PAELSGPQRR AFFDYAVNRK G
|
|---|
| |