Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0272 |
Symbol | |
ID | 4602528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 312099 |
End bp | 314450 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779601 |
Product | hypothetical protein |
Protein accession | YP_926153 |
Protein GI | 119773413 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.654602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA ACAAACTACT GATTGCCGCC ACCCTAGGCT CGGTACTGAC CGCTTGCGGC GGCAGCGACA ACAATGACTC ACCTATTCCC CCTACGCCTC CTCCCCCACC CGCCACCATA ACCCTGGATG GTAAGGTCGC CGATGGTTAT CTGGTCGGTG CCAGAGTGTG TGTGGATCTG AACGAAAACA AGGTATGTGA TGATGGAGAA CCCAGCGCAA CCACAGGCGC AGGCGGTAAC TTCTCCATCA CAGATGCAAC TCAACAGCAG CTGGATACCT ATCCTCTGGT TGTGGAAGTT ACTGTAGGGA CGGTCGATGA AGACACGGGT GAGGCCATCA CCAAAGGCTA TACCCTCAGC GCCCCTGCCG GATATGAGTT TGTCAGCCCG CTGACCACCA TGGTGCAGGG CGAAGTGGAA CAGGGCAGCA GTGAAGAAGA TGCCGAGGCA GCCATCAAGG CATTGCTTGG CACCACCCTA GCCCTGACAC AGGATTATGT GGCGGCACAG AATGACGACA GCCTCAGCGA CGAGCAAAAG GCAGAGTACC TGCAACTGCA TCAGGTCGCG CAGGTCACCG CCAGAGTGAT AGCCAACAAC CTGGCTCAAA TACAGGCGGC GGCCGATGCG GGGGGCATTT CGGCGGACGA TCTGATTTCT TTGATTGTGG ACACTGTGGT AAATGCCCTG GACACCATAG TGGCCCAGGT CGAGGCAGCC AGAGACGCCG GGGGTGATTT CGATCCCGAC GCCATTGCCG GGTCCGAGGA AGTCGAGAAC GAGACGTCCG TGTCTGATGA CAATCTTGAA GAGCAAATTG CAGTACTCCA TGCCGAAGCC AGCGCTGCGA CAGCCAATCT GGTTACTGAG GTCAGTGGCG ACGGCATTTT CTGGTTTGAA GGTGACTACG ATTCCGACGA GTTATGGCTC GAATACGGCC ATGTAAAATA CGACATCAGC AACCAAAAGA CCGTAGAGGT ACATTACGAG TTGGTAAACG GTGCGTTTGT GGCCCAAGGC AGTAACGAGT TCGGCACCGA CGACTTCATT TTGACCGATA CGGGTTGGCA AGCCACCACA GAAGAGGTTG TGATCACAGC GCTCAATGAT GACGGCACCA TCACCCTGAG CCACCCTGAC TTTCCCCAAC TTGCTGAGAC CATAAGCGCC AAAGAGTATG CCCTCAGCGG TCTGAATATC AGGGTACTGC TGGCTAAGCA GGACAACACC TGGCCCTGGC ATAAGGTGAT GCCTGCCGAT GTCAGTTTCA GTGAAGGCGC CAAGGCCTTT GCCATTAAAG CCAAAACGGC CAGCGATCAG TACCGGCTTT ACTACTGGGA CGGCTGCAAC GAAGGCGATA TGGTGGGGGG GTATTGCAAC AGCGTCTGGT CACGGATGGC CGGCGGCAGC GAAGGCCCTG CCACCAGCTT AAGTGCCCTT ATCTCGGCCA CCGCATCAGA CGGTACCCTC GCTAATCTGG TTGGCCCCTT TATCGCGTGG CATGGCGACA TGCAAATTCT TGCCGAGTTG ATTGAAGGCG GCATGGCAAA GTATCACAAG GTGTATTGGG GCCAGAACAG CACCGGCGAG TCCCAGCGGA TGTCGATGCT CTTTACAACC GGCGAGTGGC GTCAAATAAC GCAATCGGGA CAAACCTTAA TCCTGATGGC GCTGCCTGAC GATGTGAAGG ACTTTGGCGA ACATGAGGAT GACGGCGAAT TACTGCTGGC AGTCCATCAG GGCGCAGTAC GTCGGGGCGA ATTTATTCCC GCCGGCACCG GCGACGATGA TGAAGTGATT TTCAATCTGA CCGCGAAGAA CGACATTCTC ACCAAACTTG ACCTGACGCT CTTCAACGGT GGTTTACCTC CGGCGGATTT TGTCTGCGAA AATGGCAATA CCCAATGGGA TGACAACAGT GGCGGGCCCG TCAGCGACAC CCTCAAATCA CTGACACAAT ACCGCGAGTT GGTAAGCAGC TGCCGTGGTG AGGCAGGCGC CATGGCATTT ACTGCCGAGA TGTTGGCAGG TTACCAGTTC AAAGAGTTTG ACGCCGAGGG CAGCCTCGAA ACCCTGATCG TTTTTAACGC AAACGGTGGC TACTTCACCG ACTATATGGT CAGCCCAGCC GAAACGACAA ACTTCAACTG GAGCATTAAC GGCTTCGGCG AGATAGTGGT TGAAGCCGGC GATGGCAATG GTGGGGTTGG ATTGCGTGCT TACCTCAGTC TTATCGGTAA GTATGGCGAC TATGTCTCCA TCAAGGGCTT CAATGAAGAA AGCGACTGGG CTCCCATGGA TGGCAGTGTC GGCGAGGTCT GGAGCGACAA ATGGCTGAGA CTGGCCCAAT AG
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Protein sequence | MELNKLLIAA TLGSVLTACG GSDNNDSPIP PTPPPPPATI TLDGKVADGY LVGARVCVDL NENKVCDDGE PSATTGAGGN FSITDATQQQ LDTYPLVVEV TVGTVDEDTG EAITKGYTLS APAGYEFVSP LTTMVQGEVE QGSSEEDAEA AIKALLGTTL ALTQDYVAAQ NDDSLSDEQK AEYLQLHQVA QVTARVIANN LAQIQAAADA GGISADDLIS LIVDTVVNAL DTIVAQVEAA RDAGGDFDPD AIAGSEEVEN ETSVSDDNLE EQIAVLHAEA SAATANLVTE VSGDGIFWFE GDYDSDELWL EYGHVKYDIS NQKTVEVHYE LVNGAFVAQG SNEFGTDDFI LTDTGWQATT EEVVITALND DGTITLSHPD FPQLAETISA KEYALSGLNI RVLLAKQDNT WPWHKVMPAD VSFSEGAKAF AIKAKTASDQ YRLYYWDGCN EGDMVGGYCN SVWSRMAGGS EGPATSLSAL ISATASDGTL ANLVGPFIAW HGDMQILAEL IEGGMAKYHK VYWGQNSTGE SQRMSMLFTT GEWRQITQSG QTLILMALPD DVKDFGEHED DGELLLAVHQ GAVRRGEFIP AGTGDDDEVI FNLTAKNDIL TKLDLTLFNG GLPPADFVCE NGNTQWDDNS GGPVSDTLKS LTQYRELVSS CRGEAGAMAF TAEMLAGYQF KEFDAEGSLE TLIVFNANGG YFTDYMVSPA ETTNFNWSIN GFGEIVVEAG DGNGGVGLRA YLSLIGKYGD YVSIKGFNEE SDWAPMDGSV GEVWSDKWLR LAQ
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