Gene Sama_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0257 
Symbol 
ID4602513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp295075 
End bp295863 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content57% 
IMG OID639779586 
Productacetylglutamate kinase 
Protein accessionYP_926138 
Protein GI119773398 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAA CTAACAAAGT ATTGGTTCTC AAAGTGGGCG GCGCCCTGCT GCAGTGCGAA 
ATGGGCATGG CCAGACTGAT GGACACAGCC AGACAGCTGC TGGAAAAAGG CGAGCAGGTT
GTGCTGGTGC ACGGCGGCGG TTGTCTGGTT GACGAGCAGC TCAAAGCCAA TGGTATGGAG
ACGGTTAAGC TCGACGGTCT GCGGGTCACT CCGGCCGAGC AGATGCCCAT TATCGCCGGT
GCGCTGGCGG GTACGTCCAA CAAGTTGCTC CAGGGTGCGG CGGCCAAGGC CGGTGTGGTG
AGCATGGGCA TGAGCCTGTG TGATGCCAAC ATGGTGACTG CGGTCATCAA AGACGAGCGC
CTGGGCATGG TTGGTGAAGT GAGCCCCAAA GATGCCAAAG CACTGGAATT TATTCTCGCT
CAGGGCTGGC TGCCGATTAT CAGTTCCATC GCCATGGGCG AAGACGGTGA GCTTTTGAAC
GTGAATGCCG ACCAGGCAGC CTCAGTACTC GCCAAGCTCC TTGGCGGAAA ACTGGTGTTG
CTGTCTGACG TATCGGGCGT GCTCGACGGT AAAGGCAAGT TAATCCCCAG TTTGAACAGC
CAGGAGATAG ATGAGCTGGT CAAACTGGGC GTGATAGAAA AAGGCATGAA AGTCAAAGTA
GAAGCAGCAC TGGAAGTTGC CCAGTGGCTG GGACAACCGG TACAGGTTGC CTCGTGGCGT
GACAGCGGCC AAATGGCTGC GTTAATCAAG GGTGAGGCCG TGGGCACACA GATACAACCT
CAGGAGTAA
 
Protein sequence
MSVTNKVLVL KVGGALLQCE MGMARLMDTA RQLLEKGEQV VLVHGGGCLV DEQLKANGME 
TVKLDGLRVT PAEQMPIIAG ALAGTSNKLL QGAAAKAGVV SMGMSLCDAN MVTAVIKDER
LGMVGEVSPK DAKALEFILA QGWLPIISSI AMGEDGELLN VNADQAASVL AKLLGGKLVL
LSDVSGVLDG KGKLIPSLNS QEIDELVKLG VIEKGMKVKV EAALEVAQWL GQPVQVASWR
DSGQMAALIK GEAVGTQIQP QE