Gene Sama_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0163 
Symbol 
ID4602420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp193206 
End bp193613 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content54% 
IMG OID639779475 
Producthypothetical protein 
Protein accessionYP_926045 
Protein GI119773305 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAG GGAGTTGTTT GTGCGGCGCT ATCCATTACA CCCTTAACGG GGCCATCAGC 
GACATTATTC ATTGTCACTG TTCCCTGTGC CGCAAATCCA CCGGCAGCGC TTATGCCACC
AACGGTTTTA TCGCAGCAAG CGATCTGCAC CTCAGTGATG CTGACAATAA GCTGACCTTC
TACGAAAGCG AGCCGGGCAA GCGGAAATAT TTTTGTCAGG TTTGCGCCTC GCCGATTTAC
AGCGCCAACG CCAAATACCC GGGCCGTTAT CGCCTGCGAA TCGGCTCCCT CGACTCCGAC
ATTATCGAGC GCCCCCTATC CCATAATTTT ATTACCTCAA AGGCCAACTG GGACGACCCT
GATGCCGAGC TCCCCCGCTA CGCGGCGTTT GAGCCTTCAC GCAAGTAA
 
Protein sequence
MYKGSCLCGA IHYTLNGAIS DIIHCHCSLC RKSTGSAYAT NGFIAASDLH LSDADNKLTF 
YESEPGKRKY FCQVCASPIY SANAKYPGRY RLRIGSLDSD IIERPLSHNF ITSKANWDDP
DAELPRYAAF EPSRK