| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0122 |
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| Symbol | |
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| ID | 4602379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 135962 |
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| End bp | 136654 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779434 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_926004 |
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| Protein GI | 119773264 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.712948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGGA TCCTTGCCCA TGATTTGGGC ATTCGCTTCG GCCAACGACA ATTATTTGAG
TCGGCTAATC TGACCTTTGC CGAAGGGGAT TGCATTTACC TGATGGGTGA CAACGGCAGT
GGCAAAACCA CCCTGATGAA AATCCTCGCC GGATTACAGG CCCCTTCCCA TGGCACGGTA
ACTGCCCAGG GCTTTCCACC CCGTGGCCTG TGGCAAAAGA ACAAGCTTCA CGGCTGCGCC
GTCTACCTGC ATCAGCACCC GTACCTGTTT GAAGGCACAG TTCTGGAAAA TCTGAACCTC
GCCCTTAAAC TGGGATGTCT GGAAGACTCC CGTATCGGAC GGGCATTGGA CATGGCACAG
CTGGGGCACC TTCAACAGAG TCAGGCAAGC CATCTGTCCG GGGGTGAGCG ACAACGTCTG
GCCATTGCCC GTGCCTGGTT GCTCAGGCCC AGGTTGCTGA TGCTCGATGA GCCTGTATCC
AATATGGATA AAGATTCCCG CGAGCTGGTG CTCGACATGA CAGAACAGCT CAAGGCAGAC
GGCACCGGCT TGCTGATAGC CAGCCACCAG CATGGCCGCT TAACGGCACT GTGCCAACAT
CATTGGCTTA TCCAGGACGG CCGCATCCTC ACGGGGCGCC TTGAAGTCAA AACGCCACAA
CCACAGGAAA ACGAATATGT CCTTGCGCAT TGA
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| Protein sequence | MARILAHDLG IRFGQRQLFE SANLTFAEGD CIYLMGDNGS GKTTLMKILA GLQAPSHGTV
TAQGFPPRGL WQKNKLHGCA VYLHQHPYLF EGTVLENLNL ALKLGCLEDS RIGRALDMAQ
LGHLQQSQAS HLSGGERQRL AIARAWLLRP RLLMLDEPVS NMDKDSRELV LDMTEQLKAD
GTGLLIASHQ HGRLTALCQH HWLIQDGRIL TGRLEVKTPQ PQENEYVLAH
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