| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0115 |
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| Symbol | |
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| ID | 4602372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 129110 |
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| End bp | 130114 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779427 |
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| Product | phospholipase C |
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| Protein accession | YP_925997 |
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| Protein GI | 119773257 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.418372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.317632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGC ATCATGCACT GCTAATTACC CTGATTTTTG CCCTGCAACC TCAAGCCTAT
GCCGAATCAC TTAAAGTGAT GGCGTACAAC ATTATGCAGC TCAATGTGCA GGATTGGGAT
CAAGCCAATC GTGCTGCGCG ATTGCCTGCC GCACTGACAC AACTGTCTGA ACAGCCCGAC
GTCATTCTGG TGAGTGAAGC CTTTAACGAT GAGGCTGAAA CCGCGCTGAG TTCCCTTGCC
AGTCTATACC CATATCAAAC CGCCAATGTG GGTGAAAACT GCAGCGGCGC TGATTGGGAT
GCACTGACCG GAAGCTGCTC CAACTCCCCC ATGGTGGTAA GGGGGGGCGT TGTTATCCTG
TCTAAATACC CGATATTGGT GCGCAAGGCC CATGTGTTTA ATCACAGTTT GCAGGGTAGC
TGGGATGACT ATGCCAACAA GGGGTTTGCC TATGTCGCCA TCGAGAAAAA CGGCGAGCGA
TTTCACCTGA TTGGCACTCA CTTGCAGGCA ACCCACGACG ATGACACAGC GCAAGAGCAT
CAGGTTCGTC TGGGGCAACT GGGCGAAATT CAGGCCTTTA TCGAGGCTGA GCAGATCCCG
GCAAATGAGG CTGTCATTAT CGGCGGTGAT ATGAATGTGG AATGGAGCAA ACAACAGGAA
GTGACCGATA TGCTGGCCAC CGTCAATGCC GGGCTGAATT TTTCTACTCC GGTAACAGGG
TCTTTCAGCG CCAGGGATAA CTGGTTTACC AAGGCAAATG CCTACTACTT TGACTACAGC
CTCGACTACA ACGATACCCT CGACTACGTA TTCTGGCATC AGGACCACAA GCAGCCGGCC
AATAATCCGG AAATGGCTGT GCGTTATCCC AAGGCACAAA TCAGTTGGTA TTGGTGGTAT
CTGAAAGGCT ATTGGAACTT GAGTTCGGGC CGGTATTATC ACAATGGATA TTACAATGAG
CTGTCGGATC ACTATCCGGT ACAGGTGAAC TTCGAGTTCA ACTGA
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| Protein sequence | MRKHHALLIT LIFALQPQAY AESLKVMAYN IMQLNVQDWD QANRAARLPA ALTQLSEQPD
VILVSEAFND EAETALSSLA SLYPYQTANV GENCSGADWD ALTGSCSNSP MVVRGGVVIL
SKYPILVRKA HVFNHSLQGS WDDYANKGFA YVAIEKNGER FHLIGTHLQA THDDDTAQEH
QVRLGQLGEI QAFIEAEQIP ANEAVIIGGD MNVEWSKQQE VTDMLATVNA GLNFSTPVTG
SFSARDNWFT KANAYYFDYS LDYNDTLDYV FWHQDHKQPA NNPEMAVRYP KAQISWYWWY
LKGYWNLSSG RYYHNGYYNE LSDHYPVQVN FEFN
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