| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0028 |
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| Symbol | |
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| ID | 4602285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 27239 |
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| End bp | 30427 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779337 |
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| Product | amidohydrolase |
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| Protein accession | YP_925910 |
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| Protein GI | 119773170 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.847177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00656795 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAAGA CCCGTCTGCA CCCAACCATG ATTGCGGTGG CATTGGCTTT TGCTCCTGCA
ACCTATGCCG CCAACGAAGC AGAAACCTGG CAAGTAAACG CCCCTACCAA TGCTCCCCTC
GAAAAAGTCA GTGTCGATGT AAACGAAGGC ACATGGATGA ACCTGAGCCT AAGCCCTGAT
GGTAAATACA TAGTGTTTGA CCTCTTGGGT GATATCTACC GTATCCCAGC CAAGGGCGGT
GAAGCTGAAG TGCTTGCCAG TGGCATAGCC TGGCAGATGC AGCCAGTTTA CAGCCCAGAT
GGTAAATACA TTGCCTTTAC CTCGGATCAG GATGGCGGTG ACAACCTCTG GGTCATGGAT
GCCGACGGTA AAAACCCACG CGCAGTCACC AAAGAAACTT TCCGCCTGAT TAACAGTCCA
GCCTGGAGCC CTGATTCGCA GTATCTGGTT GGTCGCAAGC ACTTTACCGC CAGTCGCAGT
CTGGGTGCCG GTGAGGTGTG GCTCTACCAC ATCAGTGGTG GCGAAGGTGT TCAGCTAACT
GAACGCCCCA ATGACCAGAA GGACCTGGGT GAGCCCGCAT ACTCACCCGA CGGCCGTTAT
ATCTATTTCA GTCAGGATGC AACGCCCGGA AAAACCTTCC ACTACTCCAA AGATTCTGTG
GCTGGTATCT ACAAAATCAA ACGCTACGAC ACCCAAACCG GTGAGATTGA AGTGTTGATC
GAGGGTACAG GTGGTGCAAT ACGCCCTACA CCCAGCCCGG ATGGCAAAAA GCTCGCCTTT
ATCAAGCGCG ATGGATTCCA ATCCACTCTC TATTCATTGG ACCTGGCTTC TGGTGCCAAA
GAAAAACTGT ATGGCGAGCT GGATCGTGAC ATGCAGGAAA CCTGGGCCAT TCACGGTGTT
TACCCCACCA TGGCCTGGGA TAAAAGCAGC AACGATATTC TGTTTTGGGC CAAGGGCAAG
ATCCAACGTC TAAACGTATC CAGCAAAAAA GTTACCGAAG TGCCCTTCCA CGTGAAAACA
CAACTGGATG TGCAGCCCTC GGTTCGATAC ACCCAAAACC TTGACCACGA TAACTTCGAT
GTGAAAATGC TGCGCATGGC ACAGGTTTCA CCCGACGGTA AACATGTAGT CTATGAAGCC
CTGGGCAAAC TCTGGCTTAA ATCCTTACCC GAAGGCAAAG TGACCCGTCT GACCAAGCTG
GATGACGGTA TTTCTGAGCT GTACCCAACC TGGTCACGGG ATGGCAAGCA ATTGGCCTTT
ACCACTTGGA CCGATAAGGA TCAGGGTTCC GTATTGGTAA TTAACCTCGG TAATCGTAAG
ACAACCACTA TTACTCAGGT GCCTGGCAAG TATGTTGAAC CGGTCTTCTC ACCCACCGGC
GAACTGCTGG TCTACCGTAA AGCCAGCGGT GGTTATATCA CTCCGACGAC CTGGTCAAAC
GACCCTGGTA TCTATAAGGC GAGCCTGAAG ACCAAAGAAA ATACCCGCAT CAGCGCGCTG
GGCTTCCAAC CCCAGTTTGG TGCCGATAGT AACCGGGTGT ACTTTATGGA AAGCGGTGAG
ACTCCACAGT TCTCGTCTAT CAATCTGGAT GGTTTTGAAA AGCGCACCCA CTACACCAGC
AAACATGCAA CCGAGTTCCG CATTTCCCCC GATGGTGAGC AACTAGCATT TGCTGAGCGT
TTTAAGGTTT GGGTAACCCC GTTTGCAAAA CATGGTGAGA CCATTGAGAT TGGCCCCAAG
GCCAGCAACC TACCTGTGAC TCAACTGAGT GTTCGTGCCG GTGAGAGCTT AAGCTGGAAC
AGCAAGAGCA ATCAGCTGTA CTGGACCCTT GGCCCTGAGC TGTATCAAAT GCCAATCGAT
AGCAGCTATA GCCCCAAAGC AGATGCAGAG TCAAAACCTC AGCCAACCAT CACCAATATC
AGCTTCGAGC AAAAGGCCGA TGTTCCACGT GGAACCATTG CATTTGTTGG TGGCAAGGTC
ATCACCATGG AAAATGATCA GGTGATAGAA GACGGTGTGG TGCTGGTCAA AGACAATAAG
ATTGTCGCTG TAGGTAGTAA GACAGACGTA GCCATTCCTT CTGGCGCAGA GCGCATCGAT
ATCAGTGGCA AGACCCTGAT GCCGGGCCTG TTTGATGCCC ACGCCCACGG TGCGCAGGGT
GAGGATGAAA TCATTCCTCA GCAAAACTGG AACCTGTTTG CCGGACTGTC ACTGGGCGTG
ACTTCTATCC ACGACCCATC CAACGACACC ACTGAAATCT TTGCCGCATC CGAGCAGCAA
AAAGCCGGTA AGATTGTTGG TCCGCGGATC TTCTCTACCG GTACCATCCT CTATGGCGCT
AATCTGCCCG GTTACACCAG CCATATCGAC TCTGTGGAGG ATGCCAAGTT CCATCTTGAA
CGACTGAAAA AAGTTGGAGC CTTTAGCGTA AAGAGCTATA ACCAACCACG TCGTAACCAG
CGTCAGCAGG TGATTGCCGC CGCACGCGAG CTGGAAATGA TGGTTGTGCC TGAGGGCGGC
AGCTTGCTGC AACATAACCT CACCATGATT GCAGACGGCC ATACTACCGT AGAACACTCA
CTGCCTGCTG GAGCCATCTA TAACGATATA AAGCAGTTTT GGGGGCAAAC CAAAGTTGGC
TATACCCCAA CGCTGGTAGT CGCCTATGGT GGTATCTCGG GTGAGAATTA TTGGTACGAT
AAAACTGACG TATGGGCTCA CCCACGTTTG TCCAAATTCG TACCAGGCGA TGTGCTAAAG
GCCCGCTCTA TGCGCCGCCC TACTGCACCA GAAGGCCACT ACAACCACTT CAACGTTGCA
CGTGTCGCCA ATGAGCTGAA CAACGTTGGC GTGCACCCGA ACATAGGTGC TCACGGTCAG
CGTGAAGGCC TCGCAGCACA CTGGGAAATG TGGATGTTTG CCCAAGGTGG CATGAGCAAT
ATGGAAGTAC TGAAAACAGC CACCATCAAC CCAGCCAAGA CTTTCGCCAT GGATCATCAA
TTAGGGTCTA TCAAGGCAGG TAAGCTCGCT GACCTTATTG TTATCGACGG TGATCCACTG
GCCGATATCC GCGTGACAGA CAAGGTCACT CACACCATGG TTAACGGCAA GCTCTACGAT
GCGGAATCCA TGAATCAGCT CAACGGTGAC AAGCGCCAAC GTCAACCTTT CTTCTTCGAA
GAAATCTAA
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| Protein sequence | MFKTRLHPTM IAVALAFAPA TYAANEAETW QVNAPTNAPL EKVSVDVNEG TWMNLSLSPD
GKYIVFDLLG DIYRIPAKGG EAEVLASGIA WQMQPVYSPD GKYIAFTSDQ DGGDNLWVMD
ADGKNPRAVT KETFRLINSP AWSPDSQYLV GRKHFTASRS LGAGEVWLYH ISGGEGVQLT
ERPNDQKDLG EPAYSPDGRY IYFSQDATPG KTFHYSKDSV AGIYKIKRYD TQTGEIEVLI
EGTGGAIRPT PSPDGKKLAF IKRDGFQSTL YSLDLASGAK EKLYGELDRD MQETWAIHGV
YPTMAWDKSS NDILFWAKGK IQRLNVSSKK VTEVPFHVKT QLDVQPSVRY TQNLDHDNFD
VKMLRMAQVS PDGKHVVYEA LGKLWLKSLP EGKVTRLTKL DDGISELYPT WSRDGKQLAF
TTWTDKDQGS VLVINLGNRK TTTITQVPGK YVEPVFSPTG ELLVYRKASG GYITPTTWSN
DPGIYKASLK TKENTRISAL GFQPQFGADS NRVYFMESGE TPQFSSINLD GFEKRTHYTS
KHATEFRISP DGEQLAFAER FKVWVTPFAK HGETIEIGPK ASNLPVTQLS VRAGESLSWN
SKSNQLYWTL GPELYQMPID SSYSPKADAE SKPQPTITNI SFEQKADVPR GTIAFVGGKV
ITMENDQVIE DGVVLVKDNK IVAVGSKTDV AIPSGAERID ISGKTLMPGL FDAHAHGAQG
EDEIIPQQNW NLFAGLSLGV TSIHDPSNDT TEIFAASEQQ KAGKIVGPRI FSTGTILYGA
NLPGYTSHID SVEDAKFHLE RLKKVGAFSV KSYNQPRRNQ RQQVIAAARE LEMMVVPEGG
SLLQHNLTMI ADGHTTVEHS LPAGAIYNDI KQFWGQTKVG YTPTLVVAYG GISGENYWYD
KTDVWAHPRL SKFVPGDVLK ARSMRRPTAP EGHYNHFNVA RVANELNNVG VHPNIGAHGQ
REGLAAHWEM WMFAQGGMSN MEVLKTATIN PAKTFAMDHQ LGSIKAGKLA DLIVIDGDPL
ADIRVTDKVT HTMVNGKLYD AESMNQLNGD KRQRQPFFFE EI
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