Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0022 |
Symbol | |
ID | 4602279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 20486 |
End bp | 21418 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639779331 |
Product | Urea carboxylase |
Protein accession | YP_925904 |
Protein GI | 119773164 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00319916 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTGAAG TGGTAATGGC GGGCATTCAA ACCACGGTGC AGGATCTCGG CCGAACCGGC GTGGCGCATC TTGGACTGCC ACGCAGTGGC GCGCTGGACC GTCAGGCCCT GCTGCTCGCC AACCGGCTGC TGGGTAACCC AGATAATACG CCTGTGCTGG AGTTTGCTCT GGGCCAATCG AGCCTCCGAT TTCATCGCGA TGCCTGGATT GCCCTAACTG GTGCCGATTT CGACGCAAGA ATCGATGCCA AGCCCGTTTG GTGCGGATGG CGCAGCCTGA TCAAAGCCGG ACAAACCCTC AGCCTACGCG GCCCCAAGGC GGGCATGCGA GCCTACTTGG CAGTAGATGG CGGTGTACAG GTGCCACCGT TTATGGGCTC GGCCAGTACC GATTTATCCA GTGGTGTTGG CGGCCTTGAA GGCCGCTCCC TTAAGTCTGG GGATCGCCTC GAGCTGGGAA CAGAGAAACC GCTGAAGCAT CCGGTGGGCG CGATGCAACC TTCCTGGGAT AACCTGCTAA GGGTACTGAC AGGACCGCAA TATCCCTTAC TCAGCGACAC ATCAACACTA ACAAAGGCGA TGTGGCGCGT TCAGCCAAGC AGCAATCGCA TGGGTGCGAG ACTGGAGGGA CCTGCGCTGC ATTTAAGTAA GCCGCTGGAG ATGGCATCCC AGGGTGTGTT CCCCGGGGTC ATTCAACTGC CACCATCAGG ACAACCCATA GTACTGCTGA ACGACGCCCA AACAACCGGC GGTTATCCCA TTATCGCCAC AGTGATTGAA GCCGACCTGT GGAAACTTGC TCAGGCACGC CCCGGGCAAC CGCTGCAATT TGTCTTGGTC GACCGCGCCG AAGCACGGGC CGCTTGCGAG CGTTGGAATC AATATTTTTA TCGCCTCGGC CGAGCTCTTG GCAACGGAGA AGCCCATGTC TAG
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Protein sequence | MLEVVMAGIQ TTVQDLGRTG VAHLGLPRSG ALDRQALLLA NRLLGNPDNT PVLEFALGQS SLRFHRDAWI ALTGADFDAR IDAKPVWCGW RSLIKAGQTL SLRGPKAGMR AYLAVDGGVQ VPPFMGSAST DLSSGVGGLE GRSLKSGDRL ELGTEKPLKH PVGAMQPSWD NLLRVLTGPQ YPLLSDTSTL TKAMWRVQPS SNRMGARLEG PALHLSKPLE MASQGVFPGV IQLPPSGQPI VLLNDAQTTG GYPIIATVIE ADLWKLAQAR PGQPLQFVLV DRAEARAACE RWNQYFYRLG RALGNGEAHV
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