| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4658 |
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| Symbol | |
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| ID | 4596519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4937851 |
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| End bp | 4939230 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639779267 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_925840 |
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| Protein GI | 119718875 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.872929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGTT CCCTTTGCTC GCGGCGGCGC GTCCGAGACC GCGGCCGGGA CCGCGGCCCG
GCCCGGGAGC GGGACCGGGA GATCCTGCGG CTCGCGGTCC CGGCGTTCCT CGCGCTCGTC
TCCGAGCCGC TGTTCCTGCT CGCCGACGCG GCCATCGTGG GCCACCTCGG CACCGCGCCG
CTGGCCGGTC TCGGCATCGC GGCCGCCGTG CTGCAGACCG CGATCGGCCT GTGCGTCTTC
CTCGCCTACG GCACCACGGC CGGGGTGGCG CGGCGTCTGG GCGCCGGGGA CCTGCGGGGC
GCGCTCACCC AGGGCGTCGA CGGCCTGTGG CTGGCCGTCG GGATCGGCGC GGTCGTCACC
GTCCTCGGGG TGCTGCTCGC CGACCCGCTC GTCCACCTGT TCGGCGCCTC GGAGTCGGTC
ACCGAGCCCG CGGCGACGTA CCTGCGGATC GCGTTCCTCG GCACCACCCC CCTGCTGCTG
ATGCTCGCCG CCACCGGCGT GCTCCGGGGC CTGCAGGACA CCCGCACCCC GCTCGTGGTC
GCGGTCGGCG GCAACGTCCT CAATGTGGTG CTCAACCTGC TGCTCGTCTA CCCCGCCGGG
ATGGGCATCG CCGGCTCGGC GCTCGGCTCG GTGATCGCCC AGGTGGCGAG CGCGGCCGCC
TTCCTCGTCG TGGTCGCCCG GGCCGCCCGC GCCCAGGGCG CCTCGCTGCG TCCCGACCTG
CCCGGGATCC GCGCGGCGGG GCGTGCCGGC GTCCCGCTCG TCGTGCGCAC CCTCACGCTG
CGCGCTGCGC TGCTGCTCAC GACGTACGTC GTGACCCTGG CCGCGACCGG CGCCCGGGAG
CAGGAGGTGG ACCTGGCCAC CCACCAGCTG GCGATGACCC TCTGGACGTT CCTGGCGTTC
GTGCTCGACG CCATCGCCAT CGCCGCGCAG GCGCTCACCG GCCGGGCCCT CGGCGCGGGG
GACGTGGCCG CGGTGCGCGA GACCACCGCC CGGATGGTCC GCTGGGGCGC GCTCAGCGGG
GTGGCCACCG GGCTGCTGCT CGCGGCCGCG AGCCCGGTAC TCGGCGCCCT GTTCACCGGC
GACGGTGAGG TGCGCGACCT GCTGGTGCCC GTCCTCCTGG TCGCCGCGCT CGGTCAGCCG
GTCGCCGGCG TGGTGTTCGT CCTCGACGGG GTGCTCATCG GCGCCGGGGA CGGCGTCTAC
CTGGCCCGCG CCGGGCTCGT CACCCTGGTC GTCTACGCGC CGGTCGCCCT GCTGCTCGCG
GCCGCCTCGG CCGGGCTGGT CGCCGTCTGG GTCTGCTTCG CCGCGGTGTT CATGGGCGCC
CGGCTGGTGG TGCTCGGGCA CCGCGCCCGC GGCGACGCCT GGCTGGTCAC CGGGCGCTGA
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| Protein sequence | MTGSLCSRRR VRDRGRDRGP ARERDREILR LAVPAFLALV SEPLFLLADA AIVGHLGTAP
LAGLGIAAAV LQTAIGLCVF LAYGTTAGVA RRLGAGDLRG ALTQGVDGLW LAVGIGAVVT
VLGVLLADPL VHLFGASESV TEPAATYLRI AFLGTTPLLL MLAATGVLRG LQDTRTPLVV
AVGGNVLNVV LNLLLVYPAG MGIAGSALGS VIAQVASAAA FLVVVARAAR AQGASLRPDL
PGIRAAGRAG VPLVVRTLTL RAALLLTTYV VTLAATGARE QEVDLATHQL AMTLWTFLAF
VLDAIAIAAQ ALTGRALGAG DVAAVRETTA RMVRWGALSG VATGLLLAAA SPVLGALFTG
DGEVRDLLVP VLLVAALGQP VAGVVFVLDG VLIGAGDGVY LARAGLVTLV VYAPVALLLA
AASAGLVAVW VCFAAVFMGA RLVVLGHRAR GDAWLVTGR
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