Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4635 |
Symbol | |
ID | 4596091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4915766 |
End bp | 4916971 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639779244 |
Product | ROK family protein |
Protein accession | YP_925817 |
Protein GI | 119718852 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.892035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCTC CGTCGACCAC CCGCGGCGGC GACCTGCTGC CCGCCGCGAT CCTGGGTCTG CTCGGCAGCC GCGGATCCTC GTCCCGGGCC GACATCGCCC GCCTCCTGCG GGTCAGCCCG GCGGCCGTCA CCCAGGCCAC CAAGGGGCTG ATCGCTCGCG GGCTGGTCGC CGAGCTCGCG GCCGAGCCGT CGCGCGGCGG CCGGCCGGCC CGGCTCCTGG GCCTGGTCCG GGAGGCGGCC AGTGCTATCG GGGTCAAGGT GACCGCCGAC CACGTGGCCA CGGTGCGGGT CACGCTCGAC GGCCTGGTCG AGGCCTACAG CACCCGCCCC TTCGACCCCT GGGCGCCCGA CGCCCTCGAC CGCCTCGGCC GGCTGCTGGC CGACGCCGTC GCGGCCCACG AGGGTGCCCT TCTCGGCGTC GGGGTCGGCG TACCCGGCTC CGTGGACGCA CAGGCCTCGG GGGTCGTGAC CGCTCCGACC CTGGGCTGGG CCGAGCTGCC CGTCGGTGCC CACCTGCGCG CCGAGCTTGG CGTCCCCGTG CTGCTGGACA ACGACGTCAA CACCCTCGCG GCTGCCGAGC GGCTGTACGG CGTCGGTCAG GACGCCGCGT CGTACGTCGT CGTCACGATC GGGCGGGGCA TCGGCTGTGG CGTGGTCGTC GACGGGTCCA TCTACCGCGG TGCCCGCGGC GGGGCTGGGG AGATCGGACA CATCCCGGTC GCCGACGGAC CCGACTGCGC CTGTGGGGGC GTCGGCTGCC TGGAGGCGCT GATCGGCGAG GACGCGCTGG TCCGGCGCGG GCGCGAGGAG GGTCTGATCG GTCCCGCGCA GGGCATCGCC GAGCTGGCCG GCGCCGCCGA CGACGGCATC GCGGGCGCGC TCGAGCTGTT CGCGCTCGCC GGACGCCTGC TCGGCCGGGC GCTCGCCGGC GTGGTCCACA CCATCGACCC GGGGGTGCTG GTCATCCAGG GCGAGGGCGT GACGGCCTGG CGGCACTGGC AGTCGCCCTT CGAGACGTCG TTTCGCCGGC ATCTGATGCC GAGCCGCCGA TCTCTGCGCT ACCAGGTGCA CGCCTGGTCG GAGCAGCAGT GGACCCTGGG GGCCGCCAGT CTGGTGCTCG CCGCCCCGTT CGACTCGACC GACACGACCG GCGAGCAGGG CCGCCTGGTG CGGGCCCGTC TGCAGGACCC CGAGGGCGGT GCCTGA
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Protein sequence | MPAPSTTRGG DLLPAAILGL LGSRGSSSRA DIARLLRVSP AAVTQATKGL IARGLVAELA AEPSRGGRPA RLLGLVREAA SAIGVKVTAD HVATVRVTLD GLVEAYSTRP FDPWAPDALD RLGRLLADAV AAHEGALLGV GVGVPGSVDA QASGVVTAPT LGWAELPVGA HLRAELGVPV LLDNDVNTLA AAERLYGVGQ DAASYVVVTI GRGIGCGVVV DGSIYRGARG GAGEIGHIPV ADGPDCACGG VGCLEALIGE DALVRRGREE GLIGPAQGIA ELAGAADDGI AGALELFALA GRLLGRALAG VVHTIDPGVL VIQGEGVTAW RHWQSPFETS FRRHLMPSRR SLRYQVHAWS EQQWTLGAAS LVLAAPFDST DTTGEQGRLV RARLQDPEGG A
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