Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4617 |
Symbol | |
ID | 4596073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4891817 |
End bp | 4892842 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639779226 |
Product | cellulase |
Protein accession | YP_925799 |
Protein GI | 119718834 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCCCAC GGCCCCGCCT GCTGCGCGCC GCGGCGCTGT TGACGGCCCT GGCGCTCGGC GCCGGCCTCG CCGCGCCGGC CGGTGCCGAC CCCGTCGCAC CGGACGGGTC GCTCGCCGCG AAGGGCCAGG ACCCGCGCAA GACCCGCGGG CTGTTCGTCG ACCCGTACAT GCCCGCCGCC ACCCAGCAGG AGCAGGTGTA CCGCGAGCAG ATCGGCTCGA AGGCGCAGAC ACTGTGGATC ATCCCCGAGG CCTACCCGAC CTCCGAGGTC CGCAGCGTCG TCCGCGCCTA CACCAGGCGT GCACTGGCCG CGCGGAAGAC GCCGATGCTC ACCGTCTACG GCATCCCGGG CCGCGACTGC GGGCAGTACT CCTCGGGCAA CCCGCTGACC ACGGCCGCGC AGTACCGCAC CTGGATCCGG CGGATCTCCG GCGGCCTGGA GGACCAGCAC GCGCTCGTCG TGCTCGAGCC GGATGCGCTA CCCCTGTTCA GCAGCTCGCA CGACGCCTGC CCTACCAAGC CGGACGGCTG GCAGGGCATG CTGCGCTTCG CGAGCCGGCG CCTGAGCGGC TCCGGGGCGT GGGTCTACCT CGATGCGGGG CACTCGAACT GGACGCCGTA CGACACCCGG CCGAGATTCC TGAGGAACAG CGGCATCGGG TACGCGCGTG GCTTCAGCAC CAACGTGTCG AACTTCCGCC CGACTGTCGA CGAGAAGCAG TACGCGGCCT TCCTGTTGCG CGGACTGCGC AAGCTCGGAG TCCGCGGAAA GCACTACGTC ATCGACACCT CGCGCAACGG CGCCACCCCG AGCGCGGACG GGTACGACGT GATCAACCCG ACCTGGGCGC GCATCGGCCG CCCGCCACGG CTGGTCTTCG ACGGCGCCTT CGACGGCACG CTGTGGGTCA AGCACCCCGG CGAGTCCGAC GGCACGAAGA ACGGCGGGCC CCCGTCGGGT CAGTGGTGCG ACTTCCTCGC CGACCGGCTG CTTGGTGAGC CGGAGTCGAG CAGCTGCGAA CCCTGA
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Protein sequence | MLPRPRLLRA AALLTALALG AGLAAPAGAD PVAPDGSLAA KGQDPRKTRG LFVDPYMPAA TQQEQVYREQ IGSKAQTLWI IPEAYPTSEV RSVVRAYTRR ALAARKTPML TVYGIPGRDC GQYSSGNPLT TAAQYRTWIR RISGGLEDQH ALVVLEPDAL PLFSSSHDAC PTKPDGWQGM LRFASRRLSG SGAWVYLDAG HSNWTPYDTR PRFLRNSGIG YARGFSTNVS NFRPTVDEKQ YAAFLLRGLR KLGVRGKHYV IDTSRNGATP SADGYDVINP TWARIGRPPR LVFDGAFDGT LWVKHPGESD GTKNGGPPSG QWCDFLADRL LGEPESSSCE P
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