Gene Noca_4613 details

Gene Information

• Locus tag: Noca_4613
• ID: 4596069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 4887395
• End bp: 4889320
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639779222
• Product: thimet oligopeptidase
• Protein accession: YP_925795
• Protein GI: 119718830
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0339] Zn-dependent oligopeptidases

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.910564
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTCG CCCCTCTCGC GCTCCCGTTG CCCGACGACG CCCAGGAGTG GGTCGAGTCC 
CTGACCCGCG ACGGACTCGC GACCGCCCGC GAGCGCGCCG AGCGGCTGCG CACGTCCCCG 
CCGGCCGACC CGCTGGACCT GCTCCGCGAG TGGGACGAGG TGGCCCGCGC GCTGTCCGGC 
GTCGCGGCGG CCGCCTCGCT GCTCGCGAAC GTGCACCCGC TGGAGCCGGT GCGGACCGCG 
TGCGAGGCGG CCGACCGGGA GGTGGACCGG CTGCTCACCG AGCTGCGCCA GGACCGCGGG 
CTGTACGACG TCTTCGCGGC CGCCGACCCG GCCGGCCTGG ACCCCGCGGC AGCACGCCTG 
CTCGACAAGA CCCTCGAGGA CTTCCGGCGC GCCGGCGTCG ACCTCGACGA CGCGACCCGG 
GCCCGGCTCG CCGAGATCAA CGAGCGGCTG ACCCAGGTCG GTCAGGAGTT CAGTCGCACC 
ATCCGCGACG ACGTGCGCAC CGTCCGGGTC CCGGCCGAGC GCCTCGCCGG CCTGCCGCAG 
GACTGGCTCG ACGCCCATCC CGTCGATGCC GACGGGCTGG TCACGGTCAC CACCGACTAC 
CCGGACGCGG TGCCGGTCCG GATGTTCGTC CACGACGCGG GCGTCCGGCG CCAGGTCACG 
GTCGCGTTCC TGGAGCGTGG CTGGCCGCAG AACGAGCCGC TGCTGCGCGA GATGTTCGCA 
CTGCGGCACG AGCTCGCCAC CCTGGTCGGC TACGCCGACT GGGCGTCGTA CGACGCCGGC 
GTGAAGATGA TCGGCGACGG ACCGGCGATC CCGGCGTTCA TCGACCGGAT CGCGGCCGCC 
GCGGACGCGC CCATGCGGCG CGACCTCGAC CAGCTGCTCG AGCGCTACCG GCGCGATGTC 
CCGGACGCGA CCGCGATCGA CACCGCGGAC TCGCTGTACT ACGAGGAGCT GGTCCGCCAG 
GAGCGGCACG ACGTCGACGC GCAGCGGGTC CGGGCGTACT TCGACTTCAC CAAGGTCCGC 
CGTGGCCTGC TCGAGGTCAC CGGCCGGCTG TTCGGGCTGC GCTACGAGCC GGTCCCCGAC 
GCGACGGTCT GGCACGAGGA CGTCGCGGCG TACGACGTGC TTCGCGACGC CCCCGACGGC 
CCGGTCCCCG TCGGGCGGAT CTACCTGGAC CTGCACCCGC GCGAGGGCAA GTACAAGCAC 
GCGGCGCAGT TCACCCTCGT CGACGGGCTC GCCGGGCGGC AGCTGCCCGA GGGCGTGCTG 
GTGTGCAACT TCTCGCGCGG CCTGATGGAG CACGACCATG TGGTCACGCT GTTCCACGAG 
TTCGGGCATC TGGTCCACCA CGTGCTCGGC GGCCACGGCG GGTGGACCCG CTTCTCCGGG 
GTCGCGACCG AGTGGGACTT CGTCGAGGCG CCCAGCCAGC TGCTCGAGGA GTGGGCGTGG 
GACCCCGAGG TGCTGCGCAC CTTCGCCGCC GACGCCGACG GCGAGCCGAT CCCGGAGGAC 
CTGGTGGAGC GGATGCGGGC CGCCGACGAG TTCGGCAAGG GCTACCACGC GCGCACCCAG 
ATGTTCTACG CGGCGATGTC GTACTGGTTC CACACGTCGC GTCCCGACGA CCTGACCGCG 
GCGATGCGCG AGCTGCAGGA GCGCTACTCG CCGTTCCCCT ACATCGACGG CACCCACATG 
TTCGCGAGCT TCGGCCACCT CGGCGGCTAC TCCTCGGCGT ACTACACCTA CATGTGGTCG 
CTGGTGATCG CGAAGGACCT GTTCTCCGCC TTCGACCCCG CCGATCTCTT CGACCCGGTC 
GTCGCCGGTC GCTACCGCGA CCGCGTGCTC GCCCTCGGCG GCTCCCGGGA CGCCGCCGAC 
CTGGTCACCG ACTTCCTCGG CCGCCCCTAC ACCTTCGACG CGTACGCCGC CTGGCTCGCT 
CGCTAG 

 

Protein sequence

MSLAPLALPL PDDAQEWVES LTRDGLATAR ERAERLRTSP PADPLDLLRE WDEVARALSG 
VAAAASLLAN VHPLEPVRTA CEAADREVDR LLTELRQDRG LYDVFAAADP AGLDPAAARL 
LDKTLEDFRR AGVDLDDATR ARLAEINERL TQVGQEFSRT IRDDVRTVRV PAERLAGLPQ 
DWLDAHPVDA DGLVTVTTDY PDAVPVRMFV HDAGVRRQVT VAFLERGWPQ NEPLLREMFA 
LRHELATLVG YADWASYDAG VKMIGDGPAI PAFIDRIAAA ADAPMRRDLD QLLERYRRDV 
PDATAIDTAD SLYYEELVRQ ERHDVDAQRV RAYFDFTKVR RGLLEVTGRL FGLRYEPVPD 
ATVWHEDVAA YDVLRDAPDG PVPVGRIYLD LHPREGKYKH AAQFTLVDGL AGRQLPEGVL 
VCNFSRGLME HDHVVTLFHE FGHLVHHVLG GHGGWTRFSG VATEWDFVEA PSQLLEEWAW 
DPEVLRTFAA DADGEPIPED LVERMRAADE FGKGYHARTQ MFYAAMSYWF HTSRPDDLTA 
AMRELQERYS PFPYIDGTHM FASFGHLGGY SSAYYTYMWS LVIAKDLFSA FDPADLFDPV 
VAGRYRDRVL ALGGSRDAAD LVTDFLGRPY TFDAYAAWLA R