Gene Noca_4595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4595 
Symbol 
ID4598693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4865657 
End bp4866667 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content78% 
IMG OID639779204 
Productregulatory protein, LuxR 
Protein accessionYP_925777 
Protein GI119718812 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.878319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCCGA CCCGAGTCGA TCTCGCTGCC CGTGGCTACG CGATGGCCCG TGCGGGCCGG 
ATCGGTGAGG CACTCGCAGA CCTCGAGCAG CTGCGCGCGA CCGGCTGGGA CGACCTCGAC
GACCTCGACC GGGCATCCGT GCTGACGACG GCGGTCGACT GCCGGCTGGC CCGCGGCGAC
CTGTCGGCGG CGATGGCCCT CGGCGAGACC CTCGGCGGGT TCCTGGACCG GCCCGGCCTG
ACCGGGGCGG TCGCGCACCA CGGTCGGGGC GAGCTGTCGG CGGCGGCCGG GGACTCCGAC
CTCGCCGCCG GGCACTTCAC GCGCGCCGGC CGGCTGCTGG CCGGTGGGAC GGGCGACATC
GGACCGGGCG ACATCGGACC GGGCGACATC GGGCTGGTGC CGTGGCGGGT GGGCGCGGCG
CTGGCCGCCG TCCGGCTGGG CCGCCGCCGC GAGGGAGCGG CACTCGCCCG CGAGCACCTC
GGCGCGGCGC GGTCGTCGTG CTCGCCGTAC GCCGTCGCGG TCGCCCTGCG CACCATGGCC
ACGGTGGACG CCGGCAGCGA CCGGACCGCG CTGCTGCGCG AGGCGCGGGA CGTCCTGGCC
GGCGTGCCCG CAGCGCGGCT CGCCGCGCAG ATCGACACCG ACCTCGCCGG GCTGCTCCTG
CTCTCGGGAC GGCCGGACGC CGCGGCCGCG CTGGGACTGC TGCGTGCGGC CGAGGCGTAC
GCCGGGCGCG AGGAGCTCTG GCCGCTGCAG AGCCGGGTGC GCCGGCTGCT GGACCGGATG
GGCGAGCCGG CCCGGCCGGT GCACGGCGAG GCGCTCGCGG CGCTCACCGC CGCGGAGCGC
CGGGTCGCCC GGCTCGCGGC CGACGGGTTG ACGAACCGGC AGATCGCCGA CCGACTGGTC
GTGACGGTCA AGGCGGTCGA GTGGCACCTC TCGCACATCT ACCGCAAGCT CGGCATCCGC
TCACGCACCG GCCTGCCCGC GAGCCTCGGC CTGGAGGCCG CGGCGCTGTA G
 
Protein sequence
MLPTRVDLAA RGYAMARAGR IGEALADLEQ LRATGWDDLD DLDRASVLTT AVDCRLARGD 
LSAAMALGET LGGFLDRPGL TGAVAHHGRG ELSAAAGDSD LAAGHFTRAG RLLAGGTGDI
GPGDIGPGDI GLVPWRVGAA LAAVRLGRRR EGAALAREHL GAARSSCSPY AVAVALRTMA
TVDAGSDRTA LLREARDVLA GVPAARLAAQ IDTDLAGLLL LSGRPDAAAA LGLLRAAEAY
AGREELWPLQ SRVRRLLDRM GEPARPVHGE ALAALTAAER RVARLAADGL TNRQIADRLV
VTVKAVEWHL SHIYRKLGIR SRTGLPASLG LEAAAL