Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4573 |
Symbol | |
ID | 4598671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4840818 |
End bp | 4841555 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639779182 |
Product | ABC transporter related |
Protein accession | YP_925755 |
Protein GI | 119718790 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.958024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCGC TGCTCGAGAT CACCGGACTG CGCAAGTCCT ACGGCGACAA GGTCGTGCTC GACGACGTCT CCTTGGCGGT GGCGCCGCAC GACGTGATCT GCCTGATCGG CTCGTCGGGG TCCGGCAAGT CCACGCTGCT GCGCTGCCTG AACCTGCTCG AGGACATCGA CGACGGGGTG ATCCGGTTCG AGGGTGCGGA GATCTCCGAC CCGCGCGTCG ACGCGCGGGC GGTCCGCAAG CGGATCGGCA TGGTCTTCCA GGCCTACAAC CTGTTCCCCC ACCTGACCGT GCTGGACAAC TGCACGCTCG CGCCGCGCCA GGTGCACGGC GTACGGCGCG CCGACGCCGA GGCGCGTGCC CGCGAGCTGC TCGAGCGCTT CGGGTTGGCC GACCAGGCCG CGAAGCACCC CGACAAGCTC TCCGGTGGCC AGCAGCAGCG CGCCGCCCTG GTCCGCGCGC TGTGCACGCA CCCGACCCTG CTGCTGCTCG ACGAGATCAC CGCGGCCCTC GACCCCGAGC TGGTCGGCGA GGTCCTCGAG ATCGTCCGCG CCGAGGCCGA GCGCGGGATG ACGATGGTGC TCGCCACCCA CGAGATGGCC TTCGCCCGCG ACGTCGCCAC CCGGGTCTGC TTCCTCGACC AGGGCCGGAT CCTCGAGCAG GGCCCGCCCG CCGAGATCTT CAGCAACCCC CGCGAGGAGC GGACCCGGCA CTTCCTGCGG CGGGTGCTGC CGGGCTGA
|
Protein sequence | MSALLEITGL RKSYGDKVVL DDVSLAVAPH DVICLIGSSG SGKSTLLRCL NLLEDIDDGV IRFEGAEISD PRVDARAVRK RIGMVFQAYN LFPHLTVLDN CTLAPRQVHG VRRADAEARA RELLERFGLA DQAAKHPDKL SGGQQQRAAL VRALCTHPTL LLLDEITAAL DPELVGEVLE IVRAEAERGM TMVLATHEMA FARDVATRVC FLDQGRILEQ GPPAEIFSNP REERTRHFLR RVLPG
|
| |