| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4558 |
|---|
| Symbol | |
|---|
| ID | 4597077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4823098 |
|---|
| End bp | 4823916 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639779169 |
|---|
| Product | RDD domain-containing protein |
|---|
| Protein accession | YP_925742 |
|---|
| Protein GI | 119718777 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATT CCGGTACTCC GCCGCAGGAC CCGAACGCCA ACCCCTACGG CGCGCCCCAG
CCGGACGGCG AGCCCGCCGG CCAGCCGGCG CCGCCCCCGT ACGGCCAGCC CGCCCCGTCT
CCGTACGGCC AGCCGGCGTC GCCTTCGTAC GGCCAGCCCG CCCCGCCTCC GTACGGTCAG
CCGGCGCCGC CCCCGTACGG CCAGCCCGCC CCGCCCCCGT ACGGTCAGCC CGCCCAACCG
CCGTACGACC AGACCTATGG CCAGACCCCG TACGGACAGC CCTACGGCCA GCCCTACGCC
CAGGCGGGGT ACGGCGCGCC GGCACCGGTC TACGACTACG CGCACTGGGG CAAGCGGGCC
GGCGGCTACC TGCTCGACAG CCTGTTCACG ATGCTGGTCG CGATCCCGGC GTACGGGCTG
CTGTTCGGCG GCATCGCGGT CGGCACCCAG GACATGGAGA CCTACACCGA CGCCGCCGGG
GTCAGCCACA CCACCGGCGA GTGGGACAAC GCGGGGACGC CGCTGGTGAT CCTCGGCGCG
GTGCTGTTCC TGCTGCCGCT GGCCTTCTTC ATCTGGAACA CCTGCCTGCG GCAGGGCCGC
ACCGGCTACA GCCTCGGCAA GGGCATCGTC GGCATCCGCC TGGTCGGTGA GTCCGACGGC
CAGCCGATCG GCGGCGGCAT GTCGTTCGTG CGCTACCTGC TGCACATGCT CGACAGCCTC
GCCTGCTACC TCGGCTGGCT GTGGCCGCTG TGGGACGCCA AGCGGCAGAC CTTCGCCGAC
AAGATCCTCC GCACGGTCGT GGTCAACCAG CCCAAGTAG
|
|---|
| Protein sequence | MSDSGTPPQD PNANPYGAPQ PDGEPAGQPA PPPYGQPAPS PYGQPASPSY GQPAPPPYGQ
PAPPPYGQPA PPPYGQPAQP PYDQTYGQTP YGQPYGQPYA QAGYGAPAPV YDYAHWGKRA
GGYLLDSLFT MLVAIPAYGL LFGGIAVGTQ DMETYTDAAG VSHTTGEWDN AGTPLVILGA
VLFLLPLAFF IWNTCLRQGR TGYSLGKGIV GIRLVGESDG QPIGGGMSFV RYLLHMLDSL
ACYLGWLWPL WDAKRQTFAD KILRTVVVNQ PK
|
|---|
| |