| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4539 |
|---|
| Symbol | |
|---|
| ID | 4597058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4803430 |
|---|
| End bp | 4804212 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639779150 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_925723 |
|---|
| Protein GI | 119718758 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3752] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TGCTGCTGGT CGCCGGCCTG TCGCTGGCGG TCGCCGTGCT GGTGATGACG
GTGACGGCGC TGGCCGCGGC CCGCGCCGGC CGGGTGTCGG TGGTCGACGT GGCCTGGGGG
ATCGCACTCG TGGCCGTCGC GCTGGTCTGC GCCGTGCTCG CCGGCACCTG GCAGTCCTGG
CTGCTCCTCG TCCTGGTCGC CGTGTGGGGT GGGCGACTCT CCGCCCACAT CTTCACCACA
TCCCGCGGCC ACGGGGAGGA CCCGCGCTAC GAGGCGCTGC TGGGCGGCAC CCTCGACCGG
GTCGGCATGG GGCGCGCGGT CCGCAAGGTG TTCCTCGTGC AGGGGGCGGC CGTGTGGCTG
GTGTCGCTGC CGCTCCAGGC CGCGGCGCTC GCCGGGGTCG ACTGGACCGG GGCGATCTGG
GTCGGGGTCG CCGTCTGGCT GGTGGGCGTG CTCTTCGAGG CGGTCGGGGA CGCCCAGCTC
GGGGCGTACC GGCGTGACCC CGACCGCGGC CCGGTGCTCG ATCGCGGGCT GTGGTCGTGG
ACGCGGCACC CGAACTACTT CGGCGACGCC TGCGTGTGGT GGGGGATCTG GCTCGCCGGC
GGGGTCGCCT CGGGCTGGGT CGCCGGCCTG GCCAGCGTCC TCTCGCCGGT CGCGATGACG
ATCTGGTTGG TGTGGATCAC CGGGGCGCGC CTGCTGGAGA GGACGATGAT GCAGCGGCCC
GGTTACCCCG AGTACGCCGC GCGCACCTCG ATGTTCGTGC CGCTGCCGCC GAAGCGCTCC
TGA
|
|---|
| Protein sequence | MTDLLLVAGL SLAVAVLVMT VTALAAARAG RVSVVDVAWG IALVAVALVC AVLAGTWQSW
LLLVLVAVWG GRLSAHIFTT SRGHGEDPRY EALLGGTLDR VGMGRAVRKV FLVQGAAVWL
VSLPLQAAAL AGVDWTGAIW VGVAVWLVGV LFEAVGDAQL GAYRRDPDRG PVLDRGLWSW
TRHPNYFGDA CVWWGIWLAG GVASGWVAGL ASVLSPVAMT IWLVWITGAR LLERTMMQRP
GYPEYAARTS MFVPLPPKRS
|
|---|
| |