Gene Noca_4534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4534 
Symbol 
ID4597053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4798145 
End bp4798798 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content72% 
IMG OID639779145 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_925718 
Protein GI119718753 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCACC GCTCCCTCCG CCGCTCCAGC GGGATCGCCG CCCTCGCCCT CGTCGCGACC 
TTCGGCCTGG CCGCCTGCGG CGGCGACTCG GACTCCGAGG CGGCGGCCGA CAACCCGGCC 
TCCAGCGCCC CCGCCTCCGA GACGGCCCCC TCCGAGACGG CGTCCGATGC GATGGACGCG 
GGCGCCGCGA CCTTCGGCGC CGGCTGCTCC GCGATCCCCG ACTCCGGTGC CGGCTCGTTC 
AACGGCATGG CGACCGAGCC GGTCGCCACC GCGGCGAGCG CGAACCCGCT GCTGAAGACC 
CTGGTGGCGG CGGTCGGCAA GGCCGGCCTG GTCGACACCT TGAACTCCGC GGACGGGATC 
ACCGTGTTCG CGCCGACCGA CGACGCCTTC GCCAAGATCC CGCAGAAGGA CCTGAACGCG 
GTGCTCGCGA ACCAGGACAC GCTCACCAAG ATCCTGACCT ACCACGTCGT GGCGGGACAG 
CTCTCCCCCG ACGACCTGGC CGGCACCCAC GAGACCCTGG AGGGCGAGAA CGTCACCGTG 
ACGGGCTCGG GCGAGGACTT CACCGTCGGC GCGGACGACG CCAAGGTGCT GTGCGGCAAC 
ATCCCGACGG CCAACGCCAC GGTCTACGTC ATCGACTCCG TCCTGATGCC CTGA
 
Protein sequence
MTHRSLRRSS GIAALALVAT FGLAACGGDS DSEAAADNPA SSAPASETAP SETASDAMDA 
GAATFGAGCS AIPDSGAGSF NGMATEPVAT AASANPLLKT LVAAVGKAGL VDTLNSADGI 
TVFAPTDDAF AKIPQKDLNA VLANQDTLTK ILTYHVVAGQ LSPDDLAGTH ETLEGENVTV 
TGSGEDFTVG ADDAKVLCGN IPTANATVYV IDSVLMP