| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4513 |
|---|
| Symbol | |
|---|
| ID | 4597032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4773409 |
|---|
| End bp | 4774575 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639779124 |
|---|
| Product | glycoside hydrolase family 3 protein |
|---|
| Protein accession | YP_925697 |
|---|
| Protein GI | 119718732 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.662398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCGT CGCCTCGTCC CGTCCTGGTC GCGGTCGCGG CCGCTGCCCT GGGGGCCGGG
CTGCTGGCGC CCGCCAGCGG GTCCGCGCAC GCGCCTGCGG TGAGCGGCCG GCACCAGGAG
ACCCGGACGG CGGCGTCGGT GTATCGGGAG ATGAGCCTGG CCCAGCGGGT CGGGCAGCTG
TTCATGGTCG GCACCCCCGC GGACCGGGTC GACCGCCGTA CCCGCGCCCA GATCCATCGC
TTCCACGTCG GCAACGTGAT GCTGACCGGC CGCAGCTATG ACGGGGTCCG CGCGCCGGCC
CGGGTGTCCC GGGCGATGCG CGGCGAGGTC GACGGGAGGT CGACCGCCGG CGTCCGGCTC
TTCGTCGCGA CCGACCAGGA GGGCGGCCAG GTCCGGGTGT TGCAGGGGCC CGGCTTCTCC
GACATCCCCT CGGCCCTGGA GCAGGGCACC TGGCAGCCGC GCCGGCTGCG TGGCGCCGCG
AAGTTGTGGG CCGGGCAGCT GCGCCGGGCC GGCGTGAACC TCGACCTGGC GCCGGTGATG
GACACCGTTC CCAGCCGGCG GGCGGCTCGG CACAACCCGC CGATCGGCCG CTACGACCGC
GAGTTCGGCT TCACGACCAA GGTCGTCGCC CGGCACGGGG TGGCGTTCCT CAACGGCATG
GCCGACGGCG GCGTCGTACC GACGGCGAAG CACTTCCCCG GCCTGGGCCG GGTCCACGCG
AACCCCGACA CCCACGCCGG CGTCACCGAC CGGGTCACGA CCCGGCACGA CGCCTACCTG
CGGCCGTTCG GGGCGGCGAT CGACGCGGGC GTCCCGATCG TGATGATGTC GACGGCGTAC
TACGAGCACC TCGACCCGCG GAACCCCGCG GCGTTCTCAC CGTTCGTGGT CGGCACCATG
CTGCGCGGCG ACCTCGGGTT CCGCGGCGTG GTCATCTCCG ACGACCTGGC CCGGGCCCGG
CAGGTCGCGG GCTTCAGCCC GGCCGGCCGG GCACTGCGGT TCATCGGCGC GGGTGGCGAC
ATCGTGCTCA GCGTCGATGC CGACCCGGTG GGGGAGATGT ACCGCGCGGT CCTCGAGCGC
GCCCGGACCA GCGAGCGGTT CCGCGCCAAG GTCGACGCGG CGGTGCTGCG GGTGCTGCGC
GCCAAGCAGG ACCGGCACCT GCTGTGA
|
|---|
| Protein sequence | MSSSPRPVLV AVAAAALGAG LLAPASGSAH APAVSGRHQE TRTAASVYRE MSLAQRVGQL
FMVGTPADRV DRRTRAQIHR FHVGNVMLTG RSYDGVRAPA RVSRAMRGEV DGRSTAGVRL
FVATDQEGGQ VRVLQGPGFS DIPSALEQGT WQPRRLRGAA KLWAGQLRRA GVNLDLAPVM
DTVPSRRAAR HNPPIGRYDR EFGFTTKVVA RHGVAFLNGM ADGGVVPTAK HFPGLGRVHA
NPDTHAGVTD RVTTRHDAYL RPFGAAIDAG VPIVMMSTAY YEHLDPRNPA AFSPFVVGTM
LRGDLGFRGV VISDDLARAR QVAGFSPAGR ALRFIGAGGD IVLSVDADPV GEMYRAVLER
ARTSERFRAK VDAAVLRVLR AKQDRHLL
|
|---|
| |