Gene Noca_4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4489 
Symbol 
ID4597008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4745816 
End bp4746712 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content72% 
IMG OID639779100 
Productcation diffusion facilitator family transporter 
Protein accessionYP_925673 
Protein GI119718708 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0696938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCTCG TCGCGAACGG CCTGCTGGCG ATCGCGAAGT CGGTCGCGGC CGCGGTGACG 
GGCTCGGCGT CGATGGTCGC CGAGGCGGCG CACTCCTGGG CCGACACCGG CAACGAGGTG
TTCCTGCTGG TGGCTGAGCG GAAGGGCAGC CGGCCGCGGG ACGAGGAGCA TCCGCGCGGC
TACGGGCGCT CGACGTACAT CTGGTCGCTG GTCGCGGCGT TCGGCCTGTT CTCGGCCGGC
GCCGTCGTCT CGCTCTGGCA CGGCATCACC GAGCTCACCG GCGAGGAGGC GGCGCCCAGC
TACGCGGTGA ACTACATCGT GCTCGGCGTC GCGTTCGTGC TCGAGGGGGT GTCCTTCGCG
CAGGCCACGC GGCAGGTGCA CGGCGCGGCC CGCCGCTTCG GGCTGCACCC GCTCCGGTTC
GTCTCCCGCA CCTCCAACCC GACGCTGCGG GCGGTGTTCT TCGAGGACTC CGCCGCGCTG
GCCGGAATCC TGCTCGCCGG CGCGGGCATC GCGCTGCACC AGGTCACCGG TGAGGCGGTC
TTCGACGCCC TCGGCTCGAT CGCGGTCGGC ATCCTGCTGG GCTTCGTGGC CGTCTTCCTC
ATGCGCCGCA ACATGGACTA CCTCCTGGGG GAGGGGCTCA CCCCCGAGCT CCGCTCGCGG
GTGATCGCGC AGCTCCTCGA GCACCCGCAG ATCGACCGGA TCACCTACCT GCACGTGGAG
TACGTCGGCC CGCAGCGGCT GTTCGTGGTC GCCGCCGTCG ACCTGACCGG CGACGACCGG
GAGGGGCACC TCGCCGTACG CCTGCGAGAC GTGGAGGCCG AGATCGAGCG CAACCCGCTG
ATCGAGGACG CGGTCCTCAC CCTCGCCCCA CCCGACGAGC CCGCCCTCAT GCCCTAG
 
Protein sequence
MALVANGLLA IAKSVAAAVT GSASMVAEAA HSWADTGNEV FLLVAERKGS RPRDEEHPRG 
YGRSTYIWSL VAAFGLFSAG AVVSLWHGIT ELTGEEAAPS YAVNYIVLGV AFVLEGVSFA
QATRQVHGAA RRFGLHPLRF VSRTSNPTLR AVFFEDSAAL AGILLAGAGI ALHQVTGEAV
FDALGSIAVG ILLGFVAVFL MRRNMDYLLG EGLTPELRSR VIAQLLEHPQ IDRITYLHVE
YVGPQRLFVV AAVDLTGDDR EGHLAVRLRD VEAEIERNPL IEDAVLTLAP PDEPALMP