| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4478 |
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| Symbol | |
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| ID | 4596997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4734002 |
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| End bp | 4735198 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639779089 |
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| Product | major facilitator transporter |
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| Protein accession | YP_925662 |
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| Protein GI | 119718697 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGGGGC GGCGCGCCCC GGGCGTGGAC CGGCCACCCG TCGCCCCGAT CCGGCTGCTC
CAGCTCGGCG CCTTCGTCAG CACGCTGGAC CGGTTCGCGC TGCCGCCGAT GCTGGTCGCG
ATCGCCCACG ACCTGGGAGC CCCGCTCGGC GAGGTCGTCA CGGCGGCCGG CGCCTACTTC
CTGGTCTACG GCCTGAGCCA GCCGGTGTGG GGCACGGTCT CCGACCGGCT CGGCCGGGTC
CGGACGATGC GGATGACGCT GCTGCTGGCG GGGGTCTTCA CCCTCGTCTC GGCGCTGAGC
TGGTCGCCGC TCTCGCTCGG GGTGACCCGC GGCCTCGCGG GCGGGTTCTT CGGCGCGGCG
TACCCCTCGA GCCTGATCTA CCTCGGCGAC ACGGTGCCCG CCCCCTCCCG GCAGCGCGAC
ATCGCACGGC TGATGGTCGG GGTGGCGATG GGCACCGCGC TCGCCTCGGT CGGCGCCGGC
GTGCTCGCCG ACGCCGTGAG CTGGCGGGTG GCGTTCGTGG TCACCGGCAT CGCGTCGCTG
GTGATGACCT GGGCCCTGCG CGGCCTGCCG GAGCCCACCG CACACGGCAG GCCGGCCTCG
GCGATGGACG GGCTGCGCGC GATCAGCGGC GCGCCGATCG CGCTGCTGAT GCTGGTGTTC
GCGTTCACCG AGGGCGCGGT GCTGCTGGGC GCCCTCACGC TGCTGCCGCC CGCGGTCGAG
AACGCCGGCG CCACCGCGGC GCTCGCCGGT GCGGTGACCG CGATCTACGG GGTCTCGGTG
TTCGCCAGCT CGCAGCTGGT CGGGCGGCTC GCCGCGACCT GGCACCCGTC GCGGCTGATC
GCGATGGGCG CAACCGCCGC CGCCGCCGGC TGCGGGCTGC TCGCGGTCTC CCAGGAGCCG
GCCGTCGCAG TGGTGGTCGC CCTGCTCGTC GGCCTGGCCT GGACCTCGAT GCACTCCTCG
CTGCAGACGT GGGCGACCGA GGTGCTGCCG GGCGCGCGGG CGACCGTGGT CTCGTTCTTC
GCCGGGTCGC TGTTCGTCGG GAGCGCGCTG GCCGCGGTGC TGGTCGCCGG CCTCGCGGAC
GCCGGCCGCT ACACGGCGAT CTACGCCGTG TACGCCGCGC TCGCGGTGCC GCTCGGCCTC
GCGGCCGGTC TGGCGCGGCG GCGCTGGGTG CGCCCGGCCG CGGAGCGGGG AACCTAG
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| Protein sequence | MRGRRAPGVD RPPVAPIRLL QLGAFVSTLD RFALPPMLVA IAHDLGAPLG EVVTAAGAYF
LVYGLSQPVW GTVSDRLGRV RTMRMTLLLA GVFTLVSALS WSPLSLGVTR GLAGGFFGAA
YPSSLIYLGD TVPAPSRQRD IARLMVGVAM GTALASVGAG VLADAVSWRV AFVVTGIASL
VMTWALRGLP EPTAHGRPAS AMDGLRAISG APIALLMLVF AFTEGAVLLG ALTLLPPAVE
NAGATAALAG AVTAIYGVSV FASSQLVGRL AATWHPSRLI AMGATAAAAG CGLLAVSQEP
AVAVVVALLV GLAWTSMHSS LQTWATEVLP GARATVVSFF AGSLFVGSAL AAVLVAGLAD
AGRYTAIYAV YAALAVPLGL AAGLARRRWV RPAAERGT
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