| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4386 |
|---|
| Symbol | |
|---|
| ID | 4596904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4637598 |
|---|
| End bp | 4638890 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639778996 |
|---|
| Product | N-formimino-L-glutamate deiminase |
|---|
| Protein accession | YP_925570 |
|---|
| Protein GI | 119718605 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.280885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAGT CCCCCTCCTC GGCGTACCTC CTCGAGCGGG CGTGGGTCGA CGGCGCCGTC
CGCGACGACG TGCTCGTCGA GATCGAGGAC GGCCGATTCA CATCCGTCAC ACCGGTAGGG
CAAAGCCTCC GCTTCTCGGG TGAAGTTTCG GCCCAGAACG TCCGGTTTCC CCGGCTAGCC
GGGGAAACCG TCCGGCTCGC CGGCCTCACC CTCCCCGGGC TGACCAACGA CCACAGCCAC
GCGTTCCATC GGGCGCTGCG GGGGCGGACC CAGCGGGGGC GGGGCACGTT CTGGACCTGG
CGCGAGCAGA TGTACGCCGT GGCGGAGCGG CTCACCCCGG ACACCTACTT CACCCTGGCC
CGGGCGACGT TCCGGGAGAT GGTGGCGGCG GGCTACACGA GCGTGTCCGA GTTCCACTAC
CTCCACGACC CGGAGCCGGC CACGGGCGAC GCCCTCCGCG AGGCCGCACG AGCGGCGGGC
ATCCGGCTCA CGCTGCTCGA CGCCTGCTAC GTCAGCAGCG GCTTCGGCGC GCCGCCGGAG
GGCGTGCAGC TCCGGTTCAG CGACGGCACC GCCGAGCGGT GGGCCGCACG GGTCGGCGCC
GGCCCGGCCG CGATCCACTC CGTGCGCGCC GTCCCCCGCG AGCAGCTGGC GGTCTTCCGC
GGCCGCGCGC CCCTGCACGT CCACCTCTCC GAGCAGGTCG CCGAGAACGA GGCCTGCCTG
GCGGCGTACG GCGTCACCCC GACCCGGCTG CTCCACGACG AGGGTCTGCT GGGTCCGGAC
ACCACCGTCG TGCACGCCAC CCACCTCACC GACGACGACA TCGCGCTGCT CGGCAGCACC
CGCACGAACG TCTGCATCAC GCCCACCACC GAGCGTGACC TCGCCGACGG GATCGGCCCG
GCGCGCCGGC TCGCGGACGT GGGCTGCCGG ATCAGCATCG GCAGCGACAG CCACGCGGTC
ATCGACCCGT TCGAGGAGCT GCGCGGCCTC GAGATGGACG AGCGGCTCGC GACCCAGGAG
CGCGGGCACT GGTCAGCTGC CGAGCTGTTA GCGATCGGCA CCGCCGGGCT GCAGATCGCG
GTCGGTGCGC CGGCCGACCT GGTCACGATC GACACGCGAA GCACCCGCAC CGCCGGCACC
GGCGCCGACG AGCACACCGC CGTCTTCGCC GCCACCGCCG CCGACGTCAC CCACGTCGTC
GTCGACGGCC GGGTCGTCGC GTCCGAGGAC GACCACGAGG ACATCGGCCG CGAGCTGGCG
GCTGCGATGG AGGCACTGTG GCAAGCACCC TGA
|
|---|
| Protein sequence | MTESPSSAYL LERAWVDGAV RDDVLVEIED GRFTSVTPVG QSLRFSGEVS AQNVRFPRLA
GETVRLAGLT LPGLTNDHSH AFHRALRGRT QRGRGTFWTW REQMYAVAER LTPDTYFTLA
RATFREMVAA GYTSVSEFHY LHDPEPATGD ALREAARAAG IRLTLLDACY VSSGFGAPPE
GVQLRFSDGT AERWAARVGA GPAAIHSVRA VPREQLAVFR GRAPLHVHLS EQVAENEACL
AAYGVTPTRL LHDEGLLGPD TTVVHATHLT DDDIALLGST RTNVCITPTT ERDLADGIGP
ARRLADVGCR ISIGSDSHAV IDPFEELRGL EMDERLATQE RGHWSAAELL AIGTAGLQIA
VGAPADLVTI DTRSTRTAGT GADEHTAVFA ATAADVTHVV VDGRVVASED DHEDIGRELA
AAMEALWQAP
|
|---|
| |