Gene Noca_4358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4358 
Symbol 
ID4596876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4608818 
End bp4609612 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content77% 
IMG OID639778968 
Productpentapeptide repeat-containing protein 
Protein accessionYP_925542 
Protein GI119718577 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.205207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCCCGC TGGAGCTGAC CGCCGACTGC AGCCGCTGCC ACGCGCTGTG CTGCGTCCTG 
CTGCCGTTCC GTCGCGACGG CGGCTTCGGC GCCGACAAGC CGGGCGGTGT GGCCTGCCAC
CACCTGCGGA CCGACGACCG GTGCGCGATC CACGCCGACC TGCGCGAGCG CGGCTGGCCC
GGCTGCGCGA CCTTCGACTG CTTCGGCGCG GGCCAGCACG TCACCCAGGT GACCTACGGC
GGCGCGTCGT GGCGCGACCT CGAGAGCACC GGCGAGCTCG GGGAGATGGC CGCCGTGCTC
TCGGTGGTGC GCCGCGTCCA CGAGCTGATC CTGCACCTCC AGGAGGTCGC CCAGCGCTCA
CCGGACCCTG CCGCGGACGA GCTCGCCGGC CGGCTGCTGG CGCTGGGCGA CGCGACGCCG
GTCGAGCTCC TGACGACCGA CCTCGAGGCG CTGCACGAGA CCTGCGGGGA CCTGCTCGCG
GCGGCCAGTC TCCGGGTCCG CGGGCCGGGC GCACCCGACC TCACGCACGC CGACCTGGCC
GGACTGGACC TGCGGCAGCG CGACCTGCGC TCGGCAGGTC TGCGCGGCGC GCTGCTCCTC
GGCGCCGACC TCCGGGCGGT GGACCTGGGG CGGGCCGACC TGCTCGGAGC CGACCTGCGT
GGCGCGGACC TGCGCGGCGC CGACCTCGCG GACGTGCTGT TCCTCACCGG ACCCCAGCTG
GCGGGGGCGC GCACCGACGA CACGACCCGG GTGCCGGGCC GGCTGTCCCG ATCGGCGGCC
GACGCCGAGG GGTGA
 
Protein sequence
MPPLELTADC SRCHALCCVL LPFRRDGGFG ADKPGGVACH HLRTDDRCAI HADLRERGWP 
GCATFDCFGA GQHVTQVTYG GASWRDLEST GELGEMAAVL SVVRRVHELI LHLQEVAQRS
PDPAADELAG RLLALGDATP VELLTTDLEA LHETCGDLLA AASLRVRGPG APDLTHADLA
GLDLRQRDLR SAGLRGALLL GADLRAVDLG RADLLGADLR GADLRGADLA DVLFLTGPQL
AGARTDDTTR VPGRLSRSAA DAEG