| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4340 |
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| Symbol | |
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| ID | 4596858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4587365 |
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| End bp | 4588807 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639778950 |
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| Product | major facilitator transporter |
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| Protein accession | YP_925524 |
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| Protein GI | 119718559 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.199167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGAGC ACGTGGTGGC GCCACCGCGG GAGGAGGAGC CGGCCTACCA GCCGCACCCG
CGGCGCTGGC GCATCCTCGG CGTCACGCTG GTCGTCGGCT TCATGGCGCT GCTCGACGTC
TCGATCGTCA ACGTCGCGAT CCCGTCGATG CGCATCGGCC TGGAGACGTC CGCCGGGACC
GTGCAGTGGG TCGTGTCCGG CTACGCGTTG GCGTTCGGCC TGACCCTGGT CGCCGGCGGC
CGGCTGGGCG ACGCGTACGG CCGCCGCCGG ATGATGCTGA TCGGCCTGCT CTGCTTCGTC
GCCTCGAGCG TCGCGGTCGG GTTCGCGCCC GACGTCGAGC TCGTGATCGC CGCCCGGCTG
CTCCAGGGCG CGTCCGCCGG GCTGCTGACC CCGCAGAACT CCGGGCTGAT CCAGGAGCTC
TTCCGCGACC GCGAGCGGGC GCGGGCGTTC GGCCTGTTCG GCTTCACCGT GTCGGTCTCG
TCGGCGACCG GCCCCGTGCT CGGCGGCCTG ATCATCGCGC TGGCCGGCGA GGACGACGGC
TGGCGCTGGC TGTTCTGGGT GAACGCACCG ATCGGCCTGG TCGCGATGGT CGCCGTGGCG
CGGCTGGTGC CGGGCCCCGA CCCCGACGCG GCGGGGCGCG GCAGCAGCCG GGTCGACGTC
CCCGGGGCGG TGCTGCTCGG TGGCGCGGTG CTGTGCCTGC TCTACCCCGT GGTGCGCATC
GAGAGCGGCG CCCGGCTGCC GCTGCTGCTG CTCGCCGGGG TGCCGCTGTT CGCGTGGGCG
TTCGTGTGGT GGGAGCGGCG TACGGCGCTG CGCGGCCGGC CGCCGCTGCT CGACATCGCG
CTGCTGCGCC GGCTGCCCGG CTACCTCAAC GGGCTGCTGG TCGGGGCGCT GTACTTCACC
GGGTTCACCG GCCTGCTGCT GGTGTTCTCG ATCTACCTCC AGGAGGGCCT CGGCCGCACC
CCGCTCCAGG CCGGGCTGCT GATGATGCCG TTCGCCGTCG GGTCGGCGAT CAGCGCGCCG
ATCGCCGGTC GCTACGTCTC GGACGCGGGC CGACGGCTCA CGGTCGGCGC GATCCTCGCG
ATGATGACCG GCGTCGCCCT CCTGGCCGCC CTGGTCCCGG GCCGCGAGCC GCTGTGGCCG
TGGCTGGTGC CGATCCTGCT GCTCACCGGC CTCGGCGGCG GCGCGGTCGT CTCGCCGAAC
ATCACGCTGA CCCTGACCGA GGTGCCCCCG CGGATGGGCG GTGCGGCCGG TGGCGCGCTG
CAGACCGGCC AGCGGATCGG GGCGTCGATC GGCGCCGCGC TGCTGGTGAC CGTCTACGGG
CTCGTCGCCG GGTCGGCCAG CACCGGCACC GCGCTCCGCG CCGCGCTGCT CACGAGCGTG
GTGGTGCTGT GCGCCGCGCT GGCCATGGCG GTGCGCGCCC TGCGCCAGCA GGACGCAGGC
TGA
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| Protein sequence | MSEHVVAPPR EEEPAYQPHP RRWRILGVTL VVGFMALLDV SIVNVAIPSM RIGLETSAGT
VQWVVSGYAL AFGLTLVAGG RLGDAYGRRR MMLIGLLCFV ASSVAVGFAP DVELVIAARL
LQGASAGLLT PQNSGLIQEL FRDRERARAF GLFGFTVSVS SATGPVLGGL IIALAGEDDG
WRWLFWVNAP IGLVAMVAVA RLVPGPDPDA AGRGSSRVDV PGAVLLGGAV LCLLYPVVRI
ESGARLPLLL LAGVPLFAWA FVWWERRTAL RGRPPLLDIA LLRRLPGYLN GLLVGALYFT
GFTGLLLVFS IYLQEGLGRT PLQAGLLMMP FAVGSAISAP IAGRYVSDAG RRLTVGAILA
MMTGVALLAA LVPGREPLWP WLVPILLLTG LGGGAVVSPN ITLTLTEVPP RMGGAAGGAL
QTGQRIGASI GAALLVTVYG LVAGSASTGT ALRAALLTSV VVLCAALAMA VRALRQQDAG
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