| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4319 |
|---|
| Symbol | |
|---|
| ID | 4596837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4568701 |
|---|
| End bp | 4570038 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639778929 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_925503 |
|---|
| Protein GI | 119718538 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.899733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG ACATCCGCGC CCGCGTCCAG GCCGTCCTCC CCGGGGTGCG CAGGGACCTG
GAGGACCTGG TGCGGATCGA GTCGGTCAGC GCCGACCCGG AGCGGGCCGC GGAGGTGCAG
CGATCGGCCG AGGCGGTGGC CCGGCTGTTC CGCGACGAGG CCTTCGACGA GGTCGACATC
GTCAGCGCCG ACGGTGGGGC GCCGGCGGTG ATCGCCCGCA AGCGCGGCCC CGAGGGGGCA
CCGACGGTCC TGCTGTACGC CCACCACGAC GTCCAGCCCG AGAACGACCA CGCCGACTGG
GACTCCCCGC CCTTCGAGCC CACCGAGCGC GACGGGCGCC TCTACGCCCG CGGCGCCGCC
GACGACAAGG CCGGCATCGC GGCCCACCTC GGCGCCCTGC GGGTGTACGG CGCCGACGTG
CCGGTCAGCG TCACGATGTT CATCGAGGGT GAGGAGGAGG TGGGGTCCGA GACGCTTCCC
GCGCTGCTCC GCGAGCACCA GGACCGGCTG CGCGCCGACG TGATCGTGAT CGCCGACTCC
GGCAACTGGG ACATCGGCGT GCCCGCCCTC ACCACGAGCC TGCGCGGCCT GGTGCGCGTC
GACGTCGAGG TGCGGACACT CACCCACGCG GTGCACTCGG GCATGTGGGG CGGCCTGGTG
CCCGACGCGC TGATGACCCT CGCCCGGCTG ATCGCCACCC TGCACGACGA CCGCGGCGAC
GTCGCGATCG AGGGGCTGCA CGCCGGCCCG GCGGCCGACG TGGACTACCC CGAGGAGCGG
CTCCGGGCCG AGTCGGGTGC GGCGCCCGGC CTCGAGTGGA TCGGCACCGG CTCGAGCGTC
GAGCGGCTCT GGACCAAGCC CGCGCTCAGC ATCACCGGCC TGGACGCCCC GAAGGTCGCC
GGCGCCAGCA ACACCCTGGT CCCGGCCGCC CGGGCCCGGA TCTCGATGCG CGTCGCTCCC
GGCGACACCA CCGAGAACGC GCTGGCCTGC CTGGTGCGTC ACCTCGAGGC GCACGTGCCC
TGGGGCGCCA CCCTCACCCA CACGGTCGTC GACACCGGCG AGGCGACCCG GATCGACGCG
ACCGGGCCGG CGTACGACGC CGCGCGTGCC GCGTTCACCG AGGCCTGGGA CGGCACCGCG
CCCGTCGACA TGGGCGTGGG CGGCTCGATC CCCTTCATCG CGGAGTTCCT GGACGCCTTC
CCCGAGGCGA GCGTGCTGGT CACCGGTGTC GAGGACCCGG ACACCCGCGC CCACGGCGCC
AACGAGGGGC TGCACCTCGC GGAGTTCGAG CGGGTCGTCC TTGCCGAGGC GCTGCTGCTC
GGCAAGCTCG GCGGCTGA
|
|---|
| Protein sequence | MTDDIRARVQ AVLPGVRRDL EDLVRIESVS ADPERAAEVQ RSAEAVARLF RDEAFDEVDI
VSADGGAPAV IARKRGPEGA PTVLLYAHHD VQPENDHADW DSPPFEPTER DGRLYARGAA
DDKAGIAAHL GALRVYGADV PVSVTMFIEG EEEVGSETLP ALLREHQDRL RADVIVIADS
GNWDIGVPAL TTSLRGLVRV DVEVRTLTHA VHSGMWGGLV PDALMTLARL IATLHDDRGD
VAIEGLHAGP AADVDYPEER LRAESGAAPG LEWIGTGSSV ERLWTKPALS ITGLDAPKVA
GASNTLVPAA RARISMRVAP GDTTENALAC LVRHLEAHVP WGATLTHTVV DTGEATRIDA
TGPAYDAARA AFTEAWDGTA PVDMGVGGSI PFIAEFLDAF PEASVLVTGV EDPDTRAHGA
NEGLHLAEFE RVVLAEALLL GKLGG
|
|---|
| |