Gene Noca_4284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4284 
Symbol 
ID4596799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4526187 
End bp4526951 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID639778891 
Productputative coenzyme PQQ synthesis protein 
Protein accessionYP_925468 
Protein GI119718503 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0229607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC TTCTCTCGCA CGACGAGTTC CGGGTGGCAC TCCAGGACGC CATCAAGGGC 
CGGGAGGCCT CGAACGCCTC CTTCAGCCAG GCCTGGGCCG ACGGCAAGCT CCAGCGTCAC
CACTTCGCCC GCTGGGCGGA GAACCACTAC CACTACGTCG GGCCGTTCGC CGACTACCTG
GGCTACATCT ACGGCAACAC CCCGGACCAC TTCACCGACG CCAAGGACTT CCTGCTCCAG
AACATGTACG AGGAGGAGCT CGCCGACATC CGACACACCG ACCTGCTGAT CCGATTCGGT
GAGGCCTGCG GCACCACCCG GGCGGCGATC GAGAACCCCA ACAACGCCAA CGCCGTGACC
CGGGGCCTGC AGGCGTGGTG CTACGCGACC TCGATGCGCG AGCACTTCGC CGTGGCCACT
GCAGCGCTGG TGGTCGGGCT GGAGTCCCAG GTGCCGCAGA TCTACAAGAA GCAGATCGTG
CCGCTGCGCG AGACCTACCG GTTCACCGAG GACGAGATCG AGTTCTTCGA CCTGCACATC
ACCTCCGACG AGGTCCACGG CGAGCGCGGG TACCAGATCG TCCTCGAGTG CGCGGACACC
CCGGAGCTCC AGCAGCGCTG CCTGCAGTAC GTGCGCTGGG GTGCCGAGAT GCGGTTCAGC
TACACGCGGG CGCTCTACGA CACCTACGTC GCCCCCGACC TGGACCCGCG CCGGGCCGAG
GAGTCCGAGG TCGTGATGGT CGACGAGCTG CTCGGGTCGG CCTGA
 
Protein sequence
MTELLSHDEF RVALQDAIKG REASNASFSQ AWADGKLQRH HFARWAENHY HYVGPFADYL 
GYIYGNTPDH FTDAKDFLLQ NMYEEELADI RHTDLLIRFG EACGTTRAAI ENPNNANAVT
RGLQAWCYAT SMREHFAVAT AALVVGLESQ VPQIYKKQIV PLRETYRFTE DEIEFFDLHI
TSDEVHGERG YQIVLECADT PELQQRCLQY VRWGAEMRFS YTRALYDTYV APDLDPRRAE
ESEVVMVDEL LGSA