Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4278 |
Symbol | |
ID | 4596793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4520452 |
End bp | 4520949 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639778885 |
Product | endoribonuclease L-PSP |
Protein accession | YP_925462 |
Protein GI | 119718497 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.17728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCAGCGC ACCCATCTGG TGACGCTCGC GACGCCGCAA ATCGGTGGAT CGAGGCTGAG ACCACCGGTC GGCTTCCCGA CCGACCGCGG CCGCAGGGCC GCTACGTCCC CGCGTTGGCC GAGGCCGGCC TGATCCTCAC CGCGGGCATG ACGCCGCGCG TCGACGGCGT CCTGCAGTAC GCCGGCCAGG TCGGCGGCAC GGTCTCCGTC GACGAGGCGC GGACCGCTGC CGGGATCGCT GTCGCGAACG CGGTCGCGGC CGCGGCCGGG GAGGCCGGGT CGCTCGACGC GATCGGCCGG GCGCTGCGGA TGACCGTCTA CGTGAACGCG GTCGGCGGCT TCACCGAGCA CTCCCGGGTC GCCGACGGCG CGAGCGAGCG GCTGGTCGAG CTCCTCGGTG AACGCGGCGT GGTCGTCCGC ACCGCGGTCG GGGTCGCGTC CCTGCCGGGC GGGGCGTGCC TCGAGGTCGA GCTCACCTGC GCCCGCGCCC GGCCGTGA
|
Protein sequence | MPAHPSGDAR DAANRWIEAE TTGRLPDRPR PQGRYVPALA EAGLILTAGM TPRVDGVLQY AGQVGGTVSV DEARTAAGIA VANAVAAAAG EAGSLDAIGR ALRMTVYVNA VGGFTEHSRV ADGASERLVE LLGERGVVVR TAVGVASLPG GACLEVELTC ARARP
|
| |