Gene Noca_4245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4245 
Symbol 
ID4596759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4483138 
End bp4483803 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content78% 
IMG OID639778851 
Productregulatory protein, TetR 
Protein accessionYP_925429 
Protein GI119718464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.933468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCACC CGAGCCCGCT GCCCGACCGC TCGCCGGTCG CGCGCGGCCG CGCCCGGGCC 
CGACACACCC GGGATGCCGT CGTGGAGACC GCGCTGCGGC TGTTCTCCGA GCACGGCTAT 
CTCGCGGTGC GGGTCGAGGA CATCGCGCGC GAGGCCGGCA TCTCGCGGGC GACGTTCTAC 
AAGTACTTCT CCGAGCGCGA GGAGATCCTG GCCGCGCTGC TGACCCGGCT GCTCGACGAC 
CAGGCGGCGG CCCAGGTCGA CCGGGTCCAC GCCGACGGCG CCGCCGGGCC GGACGGTACG 
ACGCCCGACG TCTCCACCCG GGTGCGGGCC CTGGCCCGGG AGGTCGCCGA GCGGACGCTC 
GAGCGCGAGG AGCTGGCCCG CTTCGTCTAC GCCCTCCCGG TGCGCCACGA GGCGCTGCTG 
AACGTCGAGC CGCTGCGCCG GCCGCGGGCC TGCCGGCAGC TCGACGGGCT CCTGGCCGAG 
GCGGGCGCGA CGGGCGAGCT GCGCGCCGAC GTACCGCTCG GCGCGGCGCG CGCACACGTG 
CACGCCGCGA TCGAGACGGC GCTGCGCGCC TGGGCGACCG GGCAGGCCCC GGACGCGCTG 
GCCGAGGTCG ACCGGCAGCT CGACCTCGCG CTGTACGGCG TGCTCGGGCT GCCCCACGCC 
GGCTAG
 
Protein sequence
MTHPSPLPDR SPVARGRARA RHTRDAVVET ALRLFSEHGY LAVRVEDIAR EAGISRATFY 
KYFSEREEIL AALLTRLLDD QAAAQVDRVH ADGAAGPDGT TPDVSTRVRA LAREVAERTL 
EREELARFVY ALPVRHEALL NVEPLRRPRA CRQLDGLLAE AGATGELRAD VPLGAARAHV 
HAAIETALRA WATGQAPDAL AEVDRQLDLA LYGVLGLPHA G