Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4215 |
Symbol | |
ID | 4596729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4456134 |
End bp | 4457357 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639778821 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_925399 |
Protein GI | 119718434 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.728114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTGG TCTACCTGAC GTCTCAGTAT CCGACGGGCG GGGGTGAGAC GTTCCTCAGT GCTGAGTTGG ACAGCTTGCA GAGTGCAGGA TTTGAAGTCG CTGTGGCACC GTGCCGACCG GGCGGTTCAC ATTCGCGACG GTCCGGTGAA CGCAGTCTGC TAACGGCCCA CATGCTTTCC CCGCGACTCC TCATCGCCTC CTTGTGCGCA GTACTGCGTG ATCCCCGGAT CATCGTATTT GCGGTGCTGC TCCTCGTCTC CGACATCCGC AACGCCCACA AGAACATCCT CGTACTTCCC AAAGGCATAG TAGTTGGAGC GGAGTGTATC CGTATGCGCG TGCATCACAT TCATGCCCAT TGGCTGTCCA CGCCGGCTAC GGTCGCGTTG CTGGCATCGT ACGTTTCGGG TGTTCCATTC AGTGTGACTG CCCACAGAGG GGATATCGTC GCCAAGAATC TCTTGACACT CAAGGCGCAT CGGGCTTCGT TCATTAGGTT TATCTCCAAC AGCGGATTAG ATCTCTTCCG CTCAGTTACG CCCGCGTCAC TCCAGACCCG ATTCGTGGTC GTACACATGG GGGTTGAGGT TGCCGAAGAC TTCACTCATC CCCGCGCCTT GAGTGCAGCT GACGACTTCC GGATCGCTTG TCCGGCGAAC CTGACGGCCG TTAAGGGACA TGATTACTTG TTTGGAGCGG TTGCCGTCCT ACGCCGGATC GGCCTCCCGG TGCGGCTCGA CATCGTCGGC ACAGGCGAAC GTGAACGAGA ACTTCGCAGG CTCTGCTCAT CATTGGATAT TTCTGACATT GTTCGATTCT GTGGATACCA AGCCCATAAC GACCTCCTCG CGACCCTTGC GTCCGGCGGG TACGACGCGG TGGTGCTTCC AAGCGTCGAC CTTGGAAACG GTCTGCATGA AGGCATTCCG GTAACATTGA TGGAGGCCAT GGCGCGGGGG GTTCCCGTGA TATCCACCGC GACAGGTGGG ATTCCCGAAC TTCTGCAGGG CGGTTACGCG CGAATGCTGG TCGAGCCATG CAATGTGCAA GCGCTTGCCG ATTCTATCCG AGTCTTATTC CAGTCGGACG ACTTGCGTCA AGAGTTGTCA ACACTTGGAC GCGAGATCGT GAAGCGAGAA TTCAACGCAC AACTAAACGG CGTGGAGCTG GCGCGCTGGA TTTATAACAC GACAGCTTCT GATCTCGGCC CGGCTTCTAT TTAA
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Protein sequence | MRLVYLTSQY PTGGGETFLS AELDSLQSAG FEVAVAPCRP GGSHSRRSGE RSLLTAHMLS PRLLIASLCA VLRDPRIIVF AVLLLVSDIR NAHKNILVLP KGIVVGAECI RMRVHHIHAH WLSTPATVAL LASYVSGVPF SVTAHRGDIV AKNLLTLKAH RASFIRFISN SGLDLFRSVT PASLQTRFVV VHMGVEVAED FTHPRALSAA DDFRIACPAN LTAVKGHDYL FGAVAVLRRI GLPVRLDIVG TGERERELRR LCSSLDISDI VRFCGYQAHN DLLATLASGG YDAVVLPSVD LGNGLHEGIP VTLMEAMARG VPVISTATGG IPELLQGGYA RMLVEPCNVQ ALADSIRVLF QSDDLRQELS TLGREIVKRE FNAQLNGVEL ARWIYNTTAS DLGPASI
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