Gene Noca_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4161 
Symbol 
ID4596675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4395081 
End bp4396085 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID639778767 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_925345 
Protein GI119718380 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00395253 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTC TCGTCACCGG CGGCGCCGGC TACATCGGCT CGACCACCGC CAAGGCGCTC 
GAGGAGGCCG GCCACACGCC GGTGATCCTC GACTCGCTGC TCACCGGCCC CCTGGCGTTC
GTGCGCGACC GGATCTTCTA CGAGGGCGAC ATCGCCGACC GGGCCCTGGT CCGCCGGGTC
TTCGACGAGC ACCCCGACAT CGACGCCACC ATCCACATGG CCGCCCGGAT CGTGGTGCCC
GAGTCGGTCG AGAAGCCCTA CGAGTACTAC CGGGACAACG TCGCCAAGTC CCTGGAGCTC
TTCGACGAGC TCAACACCCT CGGCAAGGGC CGGGTGCTGT TCTCCTCCTC CGCGTCGATC
TACGCCCTCA AGGACGACTT CGAGGTCTCC GAGGGCGACC GGCTCGAGCC GGCCTCGCCG
TACGCCCGGA CCAAGCGGAT GATGGAGGAG GTGCTCCAGG ACATGTCGGC GGCGACCGAC
CTGCGGGCGA TCATCCTGCG CTACTTCAAC CCGATCGGCT CCGACCCGGA CCTGGAGTCC
GGCATCTACG CCAAGGAGCC CTCGCACGTG CTCGGCCAGC TGGTGATGGC CGCGCGCGGG
CAGAAGGACG CCTTCACGAT CACCGGCACC GACCACCCCA CCCGCGACGG CACCGGCATC
CGCGACTACA TCCACGTCTG GGACCTGGCC CGCGCGCACG TCCGCGCGGT CGAGCGGTTC
GACGAGGTGA TCGACGCCGC CGGCGAGCCC AGCGTGATCA TCAACGTCGG CACCGGCTCC
GGGGTGACCG TGCGCGAGCT GGTCACCGCG TTCCAGAACG TGTTCGGCCA GGAGGTGCCG
GTCCGGGAGG CGCCGCCACG CCCCGGCGAC GCGGTGGGGG CGTTCGCGAA CGTCGACCGC
TCCGGGCGGC TGCTCGACTG GCGCACCGAG CTCTCCCTCG AGGACGCGAT CGCCTCGGCG
CTGGCGTGGG GCGCGAAGCG CCAGGAGATC CTGGGCTACG AGTGA
 
Protein sequence
MKVLVTGGAG YIGSTTAKAL EEAGHTPVIL DSLLTGPLAF VRDRIFYEGD IADRALVRRV 
FDEHPDIDAT IHMAARIVVP ESVEKPYEYY RDNVAKSLEL FDELNTLGKG RVLFSSSASI
YALKDDFEVS EGDRLEPASP YARTKRMMEE VLQDMSAATD LRAIILRYFN PIGSDPDLES
GIYAKEPSHV LGQLVMAARG QKDAFTITGT DHPTRDGTGI RDYIHVWDLA RAHVRAVERF
DEVIDAAGEP SVIINVGTGS GVTVRELVTA FQNVFGQEVP VREAPPRPGD AVGAFANVDR
SGRLLDWRTE LSLEDAIASA LAWGAKRQEI LGYE