| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4160 |
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| Symbol | |
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| ID | 4596674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4394302 |
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| End bp | 4395081 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639778766 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_925344 |
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| Protein GI | 119718379 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00486305 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCCC TCGTCCTGCT GGTGGCGGTC CTCCTGCTCG GAGCCGCCAC CCCGGCGTAC
GCCGGGCGGG CCGACGTCAC CGGCCTGTCG GGCCCGTCCG GCCGGGCCGC GACGCCGCTG
GCGGGCCGCG TGGTGGTGCT GGACCCGGGC CACCAGCTCG GCAACCACAA CTTCCCGCGC
AAGATCAGCC GGCAGGTGCC GGCGGGCGGC TTCGAGAAGG ACTGCAACAC CACCGGCACC
GCGACCAACG GCGGCTACCC CGAGGCGACC ATGGCCTGGC GGGTGACCCG GCTGCTGCAG
GCCCGGCTCG AGCGGCTCGG CGCGCAGGTG AAGCTGACCC GCAGCAGCAA CCGGCAGGAC
CGGTGGGGGC CGTGCGTGGA CCGGCGCGGC CGGGCCGGCA ACCGGGTCGG GGCCGACCTC
AAGGTCAGCG TGCACGGCGA CGGGTCGTAC GCCGCCGGCG CCCGCGGCTT CCACGTGATC
GCCCCGACCG ACCGGCGCCC GTGGACCCAC GACATCTACC GGTCCTCCAA GCGGCTCGCC
GTCGACACCC GCGCGGCGCT GCGCCGCCAC CGGGTGCCGG TCGCCAACTA CATCGCCGGC
GGCGACGGCC TGGACTTCCG CGCCGACCTC GGCACCCTCA ACCTCTCCGA CGTGCCCACC
GTGATGGTCG AGCTCGGCAA CATGCGCAAC CCGCGCGACG CCCACCGGAT GACCACCCCC
GCCGGCCGCG CGACGTACGC CCGCGCCCTC ACCGCCGCGA TCCGCGCCTT CCTCCGCTGA
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| Protein sequence | MRALVLLVAV LLLGAATPAY AGRADVTGLS GPSGRAATPL AGRVVVLDPG HQLGNHNFPR
KISRQVPAGG FEKDCNTTGT ATNGGYPEAT MAWRVTRLLQ ARLERLGAQV KLTRSSNRQD
RWGPCVDRRG RAGNRVGADL KVSVHGDGSY AAGARGFHVI APTDRRPWTH DIYRSSKRLA
VDTRAALRRH RVPVANYIAG GDGLDFRADL GTLNLSDVPT VMVELGNMRN PRDAHRMTTP
AGRATYARAL TAAIRAFLR
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