| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4148 |
|---|
| Symbol | |
|---|
| ID | 4596662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4382242 |
|---|
| End bp | 4383315 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639778754 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_925332 |
|---|
| Protein GI | 119718367 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCGC ACCCCGTTCG AGACCGTCGC CCGTCGCAGC TCCGCACTGG AGCCGGCCTG
CTGGTCACCG TGGCCGTCCT CGCCCTCACT GCCGCCTGCG GAGGGACCAC GGGCGACGAA
GGCTCCGACA GCGCCGGTGG CGACCTGCCC CTGGTGTACG GCGTGTTCGC CACCCCGCTC
GAGGAGCCCT GGGACGGCGC CATCCACGCG GCGCTTGAGT CCGCGGCCGC GGACGGGCTG
ATCGAGTACA AGCACGTCGA CGACCTCAGC ACCTCCGACG CCATGGAGCG GTCGCTGCGC
GACATCGCCA CCAACGAGAA GCCGGACGCG ATCATCGGGG ACGCGTTCGC CGCCGAGGAG
GCGGTCCGCA AGGTAGCTGC CGAGTTCCCG GACATCCCGT TCGCCTTCGG ATCCGGTGGC
GAGCCGGTGG AGCCGAACAT GAGCGTCTTC GACAACTGGC TCCAAGACCC CGCCTACCTG
GCGGGCATGC TGGCCGGCGG TCTGACCGAG AGTGGAACGA TCGGGGTGGT CGGCGCCATG
CCGATTCCGG AGGTGAACCG GATCGTCAAC GCCTTCGTCC TCGGTGTGAA GGAGACCAAC
CCCGACGCGA CGGTCAAGGT GTCGTTCATC AACAGCTTCT TCGACCCGGC CGCGGCCAAG
CAGGCCGCGC AGGCCCACAT CTCGGCCGGA GCCGACGTCC TCTTCGCCGA GCGCGACGGA
GTTATCGCCG CCGCGGAGGA GGCCGACATC CCGGTCATCG GAATGATGGT CGACCAGAAG
GCCGAGTCGC CCGAGCACGT CGTGACGTCC CTGATCTGGG ACGTCCGGCC GACGGTCGAC
GCGGTGGTCG ACCAGATCGA GAACGGTCCC GAAGGAGTCG ACCTCGGCAA GTACTCCTTC
ATGGCGGCCG GTGGCTCGTC CATCGCCGAC ATCAACACCG ACATCGTCGG CGGGGTCCCC
GACGACCTGG CCGCTCGCGT CGAGGACATG CGCGCCGCCA TGGAGGACGG CACCTTCGAG
ACACCTGTGG ACGAGAGCGC GCCGGCGAAG TCGATCGACG TCTCCGCGAA GTGA
|
|---|
| Protein sequence | MLAHPVRDRR PSQLRTGAGL LVTVAVLALT AACGGTTGDE GSDSAGGDLP LVYGVFATPL
EEPWDGAIHA ALESAAADGL IEYKHVDDLS TSDAMERSLR DIATNEKPDA IIGDAFAAEE
AVRKVAAEFP DIPFAFGSGG EPVEPNMSVF DNWLQDPAYL AGMLAGGLTE SGTIGVVGAM
PIPEVNRIVN AFVLGVKETN PDATVKVSFI NSFFDPAAAK QAAQAHISAG ADVLFAERDG
VIAAAEEADI PVIGMMVDQK AESPEHVVTS LIWDVRPTVD AVVDQIENGP EGVDLGKYSF
MAAGGSSIAD INTDIVGGVP DDLAARVEDM RAAMEDGTFE TPVDESAPAK SIDVSAK
|
|---|
| |