| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4127 |
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| Symbol | |
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| ID | 4596641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4358432 |
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| End bp | 4359634 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639778733 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_925311 |
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| Protein GI | 119718346 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.515914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTT TCAAGACGGT GCGGCGCGCG CTGGTCGCGG CGATCGCTCT CGGATCGATG
CTGAGTGTCG CCGCGTGCGG CAACGGCGAG GCCGGCAGCG CGTCCGGCAC TGACAGCGGC
AGCGCCGATG ACCCCCTGCG GGTCGGCCTG CTGTTCTCCC TGACCGGCCC CGCGGCGCCG
TACGGCATCA GCGAGCGCAA CGGCGCCCGC GTCGTGCTCG ACCAGATCAA CGAGGACGGC
GGGATCAACG GCCAGCAGAT CGAGATCTTC GAGGCCGACG ACAAGACCGA CCCGACCGAG
GCGGCCCAGC AGGCCCGCAA GCTGATCACC CAGGACAAGG TCGACGTGAT CATCGGCACC
ACCGCAGGCG GCAACACGCT CGCCTACGCA CCGATCGCGG CCGGCCTGAA GACGCCGATC
CTGGCCACCA ACGGCACGAT CTCGGTGACC GACAAGGCCA ACGACTTCTG GCCCTGGATC
TTCCGGTCCG CGCCGAGCGA CCTGGTCACC ATGCAGGCGA TGTTCGACCA GGTGGTGGCC
GAGGGGAAGA CCCGGATCGG CATCTTCGCC GAGCAGTCGG CGTACGGCGA CGCCAGCGTC
GCGTACCTCG AGGAGCAGGT CGAGAAGGCC GGGCTCGAGA TCGTCGCGGA GACCAGCGCC
GCGGTCACGG ACACCGACTT CACCGCGCAG GCGACCAAGC TGCGCAACGC CGACCCGGAC
GTCGTCCTGC TCGTCACCGG TGCGACCGCG CTCGGCGTCG GCATCGCGCG GGCGGTCCGC
CAGGGTGGCT CCGACGTGGA CATGTGGGGC GGCATCGGCC TGGCCCAGCA GGGCTTCATC
GACGGCGCCG GCCCCGACGC CGAGGGTGTC CACATGGTCG CGATGAACAA CTGGAACGAC
CCGTCCGAGG ACGAGCAGCA GCTCAAGGAC CTGCTCGAGG CGGCCGGGTT CGAGGCCACG
TCGTTCGAGG CCGCGGGTGC CAACGGCGCT CAGGTGGTGG CCGCCGGCGC CGAGAAGGTC
GAGGGCGAGA TCACCGGGGA GAAGCTCCGC GACGCGATGG CGACCGTGTG CGACCTCAAC
ACCTACGCGA TCGGCGAGTC GGTCTGCTAC ACCGAGGACG AGCGGGACGG GATGGGCACC
GACGCCCTGG CCCTCCTGGT CGTCGAGGAC GGTGCGTTCG CGACGTACGA CCCCAACGCC
TGA
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| Protein sequence | MTRFKTVRRA LVAAIALGSM LSVAACGNGE AGSASGTDSG SADDPLRVGL LFSLTGPAAP
YGISERNGAR VVLDQINEDG GINGQQIEIF EADDKTDPTE AAQQARKLIT QDKVDVIIGT
TAGGNTLAYA PIAAGLKTPI LATNGTISVT DKANDFWPWI FRSAPSDLVT MQAMFDQVVA
EGKTRIGIFA EQSAYGDASV AYLEEQVEKA GLEIVAETSA AVTDTDFTAQ ATKLRNADPD
VVLLVTGATA LGVGIARAVR QGGSDVDMWG GIGLAQQGFI DGAGPDAEGV HMVAMNNWND
PSEDEQQLKD LLEAAGFEAT SFEAAGANGA QVVAAGAEKV EGEITGEKLR DAMATVCDLN
TYAIGESVCY TEDERDGMGT DALALLVVED GAFATYDPNA
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