| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4082 |
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| Symbol | |
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| ID | 4596596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4310245 |
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| End bp | 4311825 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639778688 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_925266 |
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| Protein GI | 119718301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.484283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGCA CAGCACGTAG TCGCTCGGCA CGAGCCCGGG CCGGGCTCGT AGCGGTCGCC
GCAGCGGCCG CCCTCCTCCT CGCCGCGTGC GGGGGAGGCT CGGGTGGCAA CCAGAGCGAC
GGGCCGGAGA CCACGAAGAT CACCGACCTG GTGGTCGACA GCGGTCAGGA GCCCGACTCC
CTGGACCCCT TCTACCGCAA CACCGCGGAG GCGCAACGCT TCTACCGCCT GGCCTACAGC
AGCATCCTGA AGTGGAACGA GGACGGTTCG CTCGCCCCTG ACCTGGCGGC GGAGCTGCCC
GAGGTGACCG ACGGCGGCAA GACGTGGACG ATCACGCTCC GCGACGGAGT CACCTTCCAT
GACGGCACAC CGCTGACGGC CGACGACGTG GTCTTCACGT TCGAGGCCGC GGCGAACCCC
GAGAACGGTG CCGTCTGGCT CTCCTCGCTG AGCTACATGG AATCCGTCAA GGCCGTCGAC
GACACCACGG TCGAGCTGAA GCTGACCGAG CCGTACGCCT ACATGGGTAG CCGGCTCGCG
ATGATACCGA TCCTGTCGGA CGAGACGCCG TACAAGACCA ACGACACCTA TGCCACAACC
GAGAACGGCA GTGGTCCGTA CGTGCTGGAG AAGCTCAACC GCGGCGACTC CATCGAGATG
GCGCGGTTCG GAGACTACTT CGGCGACCAG CCGCCCTTCG AGACCATCAC CTTCAAGGTC
GTTCCGGAGG ACGCCTCCCG GATCGCTCGC CTGCTCAACG GTGAGTCCCA CATCCTGCCG
AACGTACCCA CCGACCAGGT CGAGCTGATC AAGGACCGCG GCGCGAACGC CGCGATCGTC
GAGAAGAACG TCGTCCGCCT GTTCCTCTAC CCGTCGATGA ACCCCGACCG GCCGACCTCG
AACGTCGACT TCCGGCTTGC GATCGCCTAT GCGGCCGACC GGCAGCGGAT CGTGGACCAG
GTGTACGGCG GCGCGGGCCG TCCGAACAGC ACCTACCTGA CCTACGGATC GCTCTACCAC
GACGAGGAGG TCGGGATGAC CTTCGGTTCG ACGCCCGACA TCGAGGCCGC GAAGGAGCAC
CTCGAGGCGT CGGGCTACGA CACGAGCCGC ACCCTGAAGA TCATCGCGGT GAACAAGCCG
AGCGTGGTGA GAGCGATGAC GATCCTGCAG GCCAACCTCA AGGCGATCGG CGTGACCGCC
ACCGTCGAGT CGCAGGAGGT GGCCGGCTTC TACTCGGCGC TCATCTCCGG GGAGTACGAC
CTGATCGCCT TCGACAGCCC GGCGTCGACG TCGGCGGGCT TCGCTCCCGA CTACGTCAAC
GGTGGCCTGA ACAGCAAGGC GGCGAACAAC TTCGCGAAGT TCAACGACCC GGAGATGGAT
CGGCTCCTCG ACACGGCCAT GACGGCCCAG ACCGAGGAGG AGCAGGCCGC GGCCTGGAAG
GCGGTCCAGG AGCGTGACGT CGCGACGCAG GGCAACATCC AGCTCGTCGC GGCTCAGGTC
AGCGAGGCAT GGTCCAAGGA CCTGGTGGGC TACGAGCCCT CCGGGCTCCT GTGGCTGAAC
ACCGTGCTCG ACGTCAAGTA G
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| Protein sequence | MTSTARSRSA RARAGLVAVA AAAALLLAAC GGGSGGNQSD GPETTKITDL VVDSGQEPDS
LDPFYRNTAE AQRFYRLAYS SILKWNEDGS LAPDLAAELP EVTDGGKTWT ITLRDGVTFH
DGTPLTADDV VFTFEAAANP ENGAVWLSSL SYMESVKAVD DTTVELKLTE PYAYMGSRLA
MIPILSDETP YKTNDTYATT ENGSGPYVLE KLNRGDSIEM ARFGDYFGDQ PPFETITFKV
VPEDASRIAR LLNGESHILP NVPTDQVELI KDRGANAAIV EKNVVRLFLY PSMNPDRPTS
NVDFRLAIAY AADRQRIVDQ VYGGAGRPNS TYLTYGSLYH DEEVGMTFGS TPDIEAAKEH
LEASGYDTSR TLKIIAVNKP SVVRAMTILQ ANLKAIGVTA TVESQEVAGF YSALISGEYD
LIAFDSPAST SAGFAPDYVN GGLNSKAANN FAKFNDPEMD RLLDTAMTAQ TEEEQAAAWK
AVQERDVATQ GNIQLVAAQV SEAWSKDLVG YEPSGLLWLN TVLDVK
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