| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4015 |
|---|
| Symbol | |
|---|
| ID | 4598151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4238013 |
|---|
| End bp | 4238720 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639778621 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_925199 |
|---|
| Protein GI | 119718234 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGC CGATCCTCGA GGTCGTCGAC CTGCACGCGG CCTACGGCCG GATCGAGGTG
CTGCGCGGCG TCGACCTCCG CGTCCCCAAG GGCGCGGTGG TGGCGCTGCT GGGCCCCAAC
GGCGGCGGCA AGAGCACCCT GGTCAAGGTC ATCAGCGGCC AGAAGAAGCC CACCTCGGGT
GACATCCACC TCGGCGGCGT GCACGTCTCG GGCGCCGAGC CGGAGGAGCT GGCCCGGCTC
GGGCTGTGCA CGGTCCCCGA GGGCCGGTCG GTGTTCCCCA ACCTCAGCGT CGAGGAGAAC
CTCACGCTGA TGTCGTACGC CGGGGTGTCC GCCGAGGCGG TGCTCGACAC GGCGTACTCC
TACTTCCCCC GGCTGCACCA GCGCCGGCAC CAGCTCGCGG GCACCATGTC GGGCGGCGAG
CAGCAGATGC TCGCGATGTC GCGGGCGCTC GCCTCCGACC CGGCCCTGCT GCTGCTCGAC
GAGCTGTCCA TGGGGCTCGC GCCGCTGATC GTCGACGAGC TCTACGACAC GGTCGCGCAG
ATCGCGGAGA GCGGGGTCTC GATCCTGTGC ATCGAGCAGT TCGCCCGCAC CGCGCTGCGG
GTCTCCGACT ACGCGGCGGT GATGACCGGC GGCCGGATCG TGGCCACCGG CGAGCCCGCC
GAGATCCTCG CCACCATGTC CGACGTCATC CTCGGAGGTG CCGCATGA
|
|---|
| Protein sequence | MSVPILEVVD LHAAYGRIEV LRGVDLRVPK GAVVALLGPN GGGKSTLVKV ISGQKKPTSG
DIHLGGVHVS GAEPEELARL GLCTVPEGRS VFPNLSVEEN LTLMSYAGVS AEAVLDTAYS
YFPRLHQRRH QLAGTMSGGE QQMLAMSRAL ASDPALLLLD ELSMGLAPLI VDELYDTVAQ
IAESGVSILC IEQFARTALR VSDYAAVMTG GRIVATGEPA EILATMSDVI LGGAA
|
|---|
| |