Gene Noca_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4002 
Symbol 
ID4598137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4223973 
End bp4224665 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content73% 
IMG OID639778607 
Producturacil-DNA glycosylase 
Protein accessionYP_925186 
Protein GI119718221 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGC TGGCGGGGCT GGTCGACAAG GGGCTGATGG CGCCCGACTG GGCGCAGGCG 
CTGGCGCCGG TCGACGAGCA GATCGCGGCG ATGGGCCGGT TCCTGCGCGA GGAGCTTGCG 
GCGGGGCGGA CCTACCAACC GACGGGCGAG TGGGTCTTCC GGGCGTTCCA GCGCCCGCTC 
GCCGACGTGC GCGTGCTGAT CGTCGGGCAG GACCCCTACC CCAATCCCGA GCACCCGATC 
GGGCTGAGCT TCGCGGTCCG CGGGGACGTC TGGCCGCTGC CGCCGAGCCT GGTGAACATC 
TACACCGAGC TGCGCGACGA CCTCGGCCTG ATGCCGCCGC GCCACGGCGA CCTGACCGCG 
TGGGCGGACC AAGGCGTCAT GCTGCTCAAC CGGAGCCTCA CGGTGCGGCC CGGCGCCTCC 
AACAGCCACC GCGGCAAGGG CTGGGAGCCG ATCACCGCGT GCGCGATCGA GGCGCTCGTC 
CGCCGAGGCG GGCCGCTCGT CGCGATCCTC TGGGGCAGCG ACGCGCGCAA CCTCAGGCCG 
ATGCTCGGCC AGATCCCGGT CGTGGAGTCA CCGCACCCGT CGCCCTTGTC GGCGTACCGC 
GGGTTCTTCG GCTCGCGGCC GTTCAGCCGG GCCAACCGGC TGCTGGTCGA ACAGGGCGGT 
CGGGCCGTCG ACTGGGCCCT CCCCATGGAA TAA
 
Protein sequence
MSALAGLVDK GLMAPDWAQA LAPVDEQIAA MGRFLREELA AGRTYQPTGE WVFRAFQRPL 
ADVRVLIVGQ DPYPNPEHPI GLSFAVRGDV WPLPPSLVNI YTELRDDLGL MPPRHGDLTA 
WADQGVMLLN RSLTVRPGAS NSHRGKGWEP ITACAIEALV RRGGPLVAIL WGSDARNLRP 
MLGQIPVVES PHPSPLSAYR GFFGSRPFSR ANRLLVEQGG RAVDWALPME