Gene Noca_3981 details

Gene Information

• Locus tag: Noca_3981
• ID: 4598116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 4199794
• End bp: 4200489
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 639778586
• Product: transcriptional regulator
• Protein accession: YP_925165
• Protein GI: 119718200
• COG category: [K] Transcription
• COG ID: [COG2345] Predicted transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.340419
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACTA CAGTATGGCC CGTGAAAAAT AATCAGCTGG GCCCCCTCCC CGGTCGACGG 
CCGCGGCCGC TGACCCCGGG CCGCGCCGCG GTGCTCCAGC TGCTCCTCGA CCAGCCGGAG 
GCGCCCCGGC TGGCGGCGCT GGCCCAGGCC AGCGGCCTGC ACCCCAACAC GGTGCGCGAG 
CACCTCGAGG CCCTGGTGGC CGATGGGTGG GTGCGCCGGG TCCGCAGCGA GCCGCAGGGT 
CGTGGCCGGC CCGCGTGGCG CTACCAGTCC GTCGAGGAGC GGGGCCGCGA CGAGTACGCC 
GGTCTCGCCA CCGCACTGGC CGCCTCGATC GCCAGCACCA GCCCGGCGCC GACCGAGACC 
GCACGGTTCG CCGGCGAGCA CTGGGGCCGC GACCTGGCCG CCGAGCGCGA CCGCCGGCCG 
GAGACCCCGG AGGACGCCCG CGACGAGGTC GTCACGATGC TCGACGAGCT CGGGTTCGAA 
CCCGAGGCGG ACGCCGAGCG CGACGACGTG GTGCGGCTGA CCAGGTGCCC CCTGCTCGAG 
GCCGCCCACC GCTACCCCGG CGTCGTGTGC GAGGTCCACC GCGGCCTGGT CAGCGGCGCG 
CTCGCGACGT ACGGCGCGGA CCCGGAGGGC ACCGACCTGA TCCCGTTCGC CGAGCCCGGC 
GCCTGCCTGC TGATGGTGCC CCCGCGCGCC GACTGA 

 

Protein sequence

MFTTVWPVKN NQLGPLPGRR PRPLTPGRAA VLQLLLDQPE APRLAALAQA SGLHPNTVRE 
HLEALVADGW VRRVRSEPQG RGRPAWRYQS VEERGRDEYA GLATALAASI ASTSPAPTET 
ARFAGEHWGR DLAAERDRRP ETPEDARDEV VTMLDELGFE PEADAERDDV VRLTRCPLLE 
AAHRYPGVVC EVHRGLVSGA LATYGADPEG TDLIPFAEPG ACLLMVPPRA D