| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3971 |
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| Symbol | |
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| ID | 4598106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4187894 |
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| End bp | 4189129 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639778576 |
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| Product | transcriptional regulator domain-containing protein |
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| Protein accession | YP_925155 |
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| Protein GI | 119718190 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTTG ACGCGGATCT CCAGGCGCGA CGCCTCGACG CCGTGCGCGC GTGGACGTCG
TTCGTCGAGC GCGGCGACGA CGCGGCGGGA CTGGTGCGTC CCGAGATCCT GAGCAGCTGG
ACCCGCTCCG AGGCCGCCGT ACGCACCGAT GTCAGCGAGG CGCCGCTCGC CGACGAGGCC
GACACGGCGG CCCGCTGGCG CGGCTCGCCC CTGCAGGCCG CGGTGGAGCG GGTCGAGGCG
GAGCTGCGGC GTACCGCCGA GGACGGCGAC CTCGTCGTCG CCATCACCGA CGCCCAGACC
CGGATCCTGT GGACGTACGG CGGGCGGGTG ATGCGCCGCA AGGCCGAGAC CGTGAACTTC
GTGGTCGGTG GACGCTGGGA CGACCAGAGC GTGGGCACCA ACGCCCTCGA CCTCGCCAAC
CGGCTGGCCG CCCCGGCGAT GGTCTTCAGC GCCGAGCACT ACGCGCCGAT CGTGCACAAC
TGGGTCTGTT GGGCCGCGCC CGTGCACGAC CCGGTGACCG GCGCGCAGCT CGGCGTCATC
GACCTGTCCA CCACCTGGGA TCGGACCCAC CCGATCGGCC TGGCGACCGC GCGAGTGCTG
GCCCGGCTGA TCGAGACTGC GATGCCGGTC TCCGCGTACC ACCCCACCGC GACCGCCGAC
GAGGGCACCG AGCCGGGCCT CGTGATGCGG CTGCTCGGCA CCGCCGAGAC CTGGCTCGAC
GGGCAGCGGC TGCTGCTCAA TCGCCGGCAG ACCGAGGTCC TCGCGCTGCT CGCCATGCAC
CCGGAGGGGC TCTCGCTGGA GCACCTGCAC GCGCTGGTCT ACGGCGACCA GGCGGTCACC
CTGTCCACGC TCAAGGCCGA GGTGTCGCAC CTGCGCTCCG CGTTGGGCGG CCAGCTCACC
TCGCGGCCCT ACCGGTTGCC GATGCCGATC ACGACCGACG TCGACCTGGT GCTCGGGCTG
CTCCGCCGGG GCCGGGTCGC CGCGGCGGTC GACGCCTACG GAGGCGACCT CCTGCCCGGC
ACCAACTCCC CGGCGCTCAC CGAGCTGGGG GAGTACGTCG CGGTCGCGGT CCGCGAGGCC
CTGCTCACCG ACCCGCAGCC CGATGCGGTG GTCCGCTACG GCGAGCTGGC GCCGTACGAC
ACCGAGGTGG TCGAGGTCTG CCTGGCCGCC CTCGGCGGCC GCGCCCACCC CGCCGTACCC
CTGCTCAAGG CCCGCCTCGC CGCCGCCGCC CGCTGA
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| Protein sequence | MTVDADLQAR RLDAVRAWTS FVERGDDAAG LVRPEILSSW TRSEAAVRTD VSEAPLADEA
DTAARWRGSP LQAAVERVEA ELRRTAEDGD LVVAITDAQT RILWTYGGRV MRRKAETVNF
VVGGRWDDQS VGTNALDLAN RLAAPAMVFS AEHYAPIVHN WVCWAAPVHD PVTGAQLGVI
DLSTTWDRTH PIGLATARVL ARLIETAMPV SAYHPTATAD EGTEPGLVMR LLGTAETWLD
GQRLLLNRRQ TEVLALLAMH PEGLSLEHLH ALVYGDQAVT LSTLKAEVSH LRSALGGQLT
SRPYRLPMPI TTDVDLVLGL LRRGRVAAAV DAYGGDLLPG TNSPALTELG EYVAVAVREA
LLTDPQPDAV VRYGELAPYD TEVVEVCLAA LGGRAHPAVP LLKARLAAAA R
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