Gene Noca_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3913 
Symbol 
ID4598048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4118309 
End bp4119118 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content77% 
IMG OID639778519 
ProductRDD domain-containing protein 
Protein accessionYP_925098 
Protein GI119718133 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0538103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCCC CCGAGTTCGC GACGCTCACC ACCGACGACC TGGTCACCGG CGAGGCGGTC 
GCGCTCGACC TCCCGCCCGC GGGCCTCGGC CTGCGGATCG CCTCCGGCCT GGTCGACGTG
CTCGTCACCG CCGGCGTCCT GGTCGCGCTG GTCCTCGGCC TGGTGATCGC CGCCCTCCAG
GCGGACGAGG CGCTGCTCCA GGTCGCGATG CTGGCCGCCG TGATCGTCGC CTTCGTGGGT
TTCCCGACCG CGCTGGAGAC GCTGAGCGGC GGTCGCTCCC TGGGCAAGCT GGCGTTCGGG
CTGCGCACGG TGCGCGACGA CGCGGGGCCG ATCTCCTTCC AGCACGCGTT CGTCCGGGCC
CTGGTCGGCG TCGTCGAGAT CTACCTGTTC TTCGGCGGGC CCGCGTTCTT CTCGGCGCTG
CTGAGCGTCC GCGGCAAGCG GCTCGGCGAC TTCGCCGCCG GGACGTACGT CGTCCGTGAG
CGGGTCAAGC TGCAGCTCGG CCCGCCCGCG GCGATGCCGC CGCAGCTGGC GCGCTGGGCG
GCCGGCGCCG ACCTCGCCGC GCTGCCGACC GGCCTGGCCC TGGCCGTGCG CCAGTTCCTC
GCGCGGCTCC CGCAGATCGA CCCGGCTTCG CGGGCGAGCA TCGGCGGCCG GCTGGCCGCG
GCCGTCGAGG AGTACGTCGC CCCCGCGCCA CCAGCGGGCA CCCCACCCGA GGCGTTCCTC
GCCGCGGTCG TGGCGGCCCG GCGCGACCGC GACGCGGCCC GGCTGGCGCG GCAGGCGGAG
CTGCGCCGGC GGCTGACCCG CGACCGCTGA
 
Protein sequence
MAPPEFATLT TDDLVTGEAV ALDLPPAGLG LRIASGLVDV LVTAGVLVAL VLGLVIAALQ 
ADEALLQVAM LAAVIVAFVG FPTALETLSG GRSLGKLAFG LRTVRDDAGP ISFQHAFVRA
LVGVVEIYLF FGGPAFFSAL LSVRGKRLGD FAAGTYVVRE RVKLQLGPPA AMPPQLARWA
AGADLAALPT GLALAVRQFL ARLPQIDPAS RASIGGRLAA AVEEYVAPAP PAGTPPEAFL
AAVVAARRDR DAARLARQAE LRRRLTRDR