| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3858 |
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| Symbol | |
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| ID | 4597993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4077193 |
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| End bp | 4078020 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639778464 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_925043 |
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| Protein GI | 119718078 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC GCCCACCCGC CCCGGAGCCG CTGCCACACC CGGTCGTGGA CAACCACTGC
CACCTCGACG TCGTGCGCGA CGACGCAGAC CCGCTCCCGG TGGACCAGGC GGTCGCCGCG
GCCGCGGCGG TCGGCGTCAC CCGGATCGTC CAGATCGGCT GCGACCTGCC CGGCGCCCGC
TGGGCGGTCG AGGCGGCCGC GACGTACGAC GCGCTGGTCG CCGGCGTCGC CCTGCACCCC
AACGAGGCGC CGCGGCTGCC CGACCTGGAC GCCGCCATGG CCGAGATCGA GCGGCTCGCG
GGCGCGCACG ACAAGGTGCG CGCGGTGGGC GAGACCGGCC TGGACCACTT CCGCACCGGT
GAGGAGGGGC GGGCCGTGCA GGTCGAGTCC TTCCGCCGGC ACATCGACCT CGCCAAGCGG
CTCGACAAGA CCCTGGTCGT CCACGACCGC GACGCGCACG ACGCGGTCCT CGACGTGATC
GACGAGGAGG GGGCGCCGGC GCGCTGGGTG ATGCACTGCT TCTCCGGCGA CGCCGCCTTC
GCGCGTCGCT GCCTGGACCG TGGGGCACAC CTCTCCTTCG CGGGCACGGT GACCTTCAAG
AACGCCCAGC CGCTGCGCGA CGCGCTCGCG ATCACGCCCC TCGACCGGCT GCTGGTCGAG
ACCGATGCGC CGTACCTGAC ACCCACGCCG TACCGCGGCC GGACCAACGC CTCCTACCTC
GTCCCGCTCA CGATGCGGAC GATGGCGCAG GTCCGCGGCG CGGACCTGGA GACGCTCTGC
GCGGCCGTCG AGGCGACCAC CGAGGCGGCC TTCGGGGGCT CCTGGTAG
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| Protein sequence | MTDRPPAPEP LPHPVVDNHC HLDVVRDDAD PLPVDQAVAA AAAVGVTRIV QIGCDLPGAR
WAVEAAATYD ALVAGVALHP NEAPRLPDLD AAMAEIERLA GAHDKVRAVG ETGLDHFRTG
EEGRAVQVES FRRHIDLAKR LDKTLVVHDR DAHDAVLDVI DEEGAPARWV MHCFSGDAAF
ARRCLDRGAH LSFAGTVTFK NAQPLRDALA ITPLDRLLVE TDAPYLTPTP YRGRTNASYL
VPLTMRTMAQ VRGADLETLC AAVEATTEAA FGGSW
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