Gene Noca_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3827 
Symbol 
ID4595892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4048750 
End bp4050027 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content77% 
IMG OID639778435 
ProductATPase domain-containing protein 
Protein accessionYP_925014 
Protein GI119718049 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00884096 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTCGTC GGATCTCATG GCTGGTCGTG GCCACGACGT CGAGCGTCGT GGTCTCCTTC 
GTGATCCCGC TGTGCCTGCT GGTGCGCACC CTCGCCGAGG ACCGCGCGAT GGCGGCCGCC
GACCAGGAGG CCCGCAACGT CGCGATCCTG GTCGCGAGCC TGCACGACGA TCCGCAGCTG
CCGGGTCTGA TCGGCGATCT CGACCAGCGG GGCACGCCGT CGACGAGCGT GCTCACCGCG
GACCGGCGGG TGATCGGTGC CGACACGGCG ATGCGCGGCG ACCCGGAGGT ACGCCGCGCC
GCGGCGGGCG AAGGCTTCGA GGTGGTCGAC TCCACCGGCG GCCGGGTGCT GCTGCCCGTG
GTCGTCGAGT CCGGCACCGC GGTGGTGCGC AGCAGCGTGA CGCCCGAGGA CCTGCGGCGC
GGCGTCGCGG CGGCCTGGGC CGGCATCATC GGGCTGGGTG CCGTGCTGCT GGCGCTCGCC
CTGGTCATCG CCGCGCGGCT CGGGCGCCGG GTCAGCGAGC CGGTGCGCCA GGTCGCCGCG
GTCGCCCACC AGCTGCGGGA GGGCGACCTG CACGCCCGGG CCCGGGTCTC CGGGCCCGAG
GAGACCCAGG AGCTGGCCCG CGCGCTGAAC GCGCTCGCCG ATCGCACCGT CGAGCTGCTC
GCCGCCGAGC GGGCGAGCGT CGGCGACCTC TCCCACCGGC TGCGGACGCC GGTGACCGCG
CTCCGCCTGG ACGCGGAGGC CGTGGCCGAC CCCGCGCTCG CGGCGCGGCT GGCCGACCAC
ATCCAGGTGC TCCAGCGCTC GATCGACGTC ATCGTCAAGG AGGCCCGCCG GCCGGTGCGC
ACCGACCTGG CCGCGGCGGG CGATGCCACC GCGACCGTCC GGGAGCGGGT CACGTTCTGG
TCGGCGCTGG CCGAGGACCA GGGCCGGATG CTGACCGTCT CGCTGCCGGG CCGGCCGCTC
GTCGTACCGG TCGCGGCCGG CGACCTCGCC GACCTGGTCG ACGTGCTCGT CGACAACGTC
TTCGCGCACA CCCCCGACGG CACCGCGTTC GAGGTCGGGC TGGGCGTCGA GGACGGGCAG
GCGGTGCTGG TGGTCGCCGA CGAGGGTCCG GGGACGGCGT CGCGGCCCGG CGCCGACCGG
GTCGGCAGCA CCGGCCTGGG GCTGGACATC GCGCGGCGGA CGGCCGCCGG CTGCGGCGGC
GAGCTGCGAC TCTCCGCGCC GTCCCAGCCG GGCACCCGGG TCGAGGTCCG CCTTCCGCTG
GTGGCCGACC GCGGCTGA
 
Protein sequence
MRRRISWLVV ATTSSVVVSF VIPLCLLVRT LAEDRAMAAA DQEARNVAIL VASLHDDPQL 
PGLIGDLDQR GTPSTSVLTA DRRVIGADTA MRGDPEVRRA AAGEGFEVVD STGGRVLLPV
VVESGTAVVR SSVTPEDLRR GVAAAWAGII GLGAVLLALA LVIAARLGRR VSEPVRQVAA
VAHQLREGDL HARARVSGPE ETQELARALN ALADRTVELL AAERASVGDL SHRLRTPVTA
LRLDAEAVAD PALAARLADH IQVLQRSIDV IVKEARRPVR TDLAAAGDAT ATVRERVTFW
SALAEDQGRM LTVSLPGRPL VVPVAAGDLA DLVDVLVDNV FAHTPDGTAF EVGLGVEDGQ
AVLVVADEGP GTASRPGADR VGSTGLGLDI ARRTAAGCGG ELRLSAPSQP GTRVEVRLPL
VADRG