Gene Noca_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3812 
Symbol 
ID4599035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4032748 
End bp4033266 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content73% 
IMG OID639778420 
ProductATP-cone domain-containing protein 
Protein accessionYP_924999 
Protein GI119718034 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.581101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACTGTC CGTACTGCCG CAACACCGAC ACCCGGGTCC TCGACTCGCG AGTCGCCGAC 
GACGGCGGAT CGATCCGCCG CCGGCGTACC TGCTCGGCCT GCGCGAAGCG GTTCACGACC
GTGGAGCTGA TGCAGCTGAC CGTGCTCAAG CGCTCCGGCG CGTCCGAGCC GTTCACCCGG
GAGAAGGCCG TCGCCGGGGT CCGGAAGGCC TGCAAGGGCC GTCCGGTCAC CGAGGACCAG
CTCGCGTGCC TGGGCCAGGC GGTCGAGGAC GCGCTCCGGT TGGACGGGGC GGCCGAGGTC
CCGGCCCACG AGGTCGGCCT GGCGATCCTG GGTCCGCTGC GCGAGCTCGA CGAGGTCGCC
TACCTGCGCT TCGCCAGCGT CTACCGCGCC TTCGAGTCGG CCGACGACTT CGAGGACGAG
ATCGCGATGC TGCGCGCCGA GCGCCCGGCC GTCGCGATCG AGCCGGTGAC GGTGCCGGCC
ACGGAGCCGG CCCCACCTCA GCCCGTCGCG ACGGGCTGA
 
Protein sequence
MHCPYCRNTD TRVLDSRVAD DGGSIRRRRT CSACAKRFTT VELMQLTVLK RSGASEPFTR 
EKAVAGVRKA CKGRPVTEDQ LACLGQAVED ALRLDGAAEV PAHEVGLAIL GPLRELDEVA
YLRFASVYRA FESADDFEDE IAMLRAERPA VAIEPVTVPA TEPAPPQPVA TG