| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3656 |
|---|
| Symbol | |
|---|
| ID | 4595768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3880705 |
|---|
| End bp | 3882864 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639778264 |
|---|
| Product | MMPL domain-containing protein |
|---|
| Protein accession | YP_924843 |
|---|
| Protein GI | 119717878 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0733435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGCCG CTCTTGGTCG CCTCGTCTCC CGTCGTCCCT GGCTCGTCAT CGCCGCGTGG
GTGGTGCTCG CCGTCGCCGT CATCTCGCTG GCGCCGGCCC TCGAGACCAC CCAGCAGGAG
GAGGAGTTCC TCCCCGACCA CTACGAGTCG GTCCAGGCCT TCAAGATCCA GGACGAGGAG
TTCCCGGGCG CCACGACGCC GGCCGCCCTG ATCGTCTTCG AGCGCACGGA CGGCGCGGCG
CTGACCGAGG ACGACCAGGC CGAGGTCGGC CGGATCGCCG AGGAGCTCGG GCCGGAGCTC
GGCGAGAAGA CGTTCGTCCA GCAGGTCGTC ACCGCCGGCC CGGACGGCAA GCCCAACGTC
TCCGAGGACG GCCAGGTGCA GATCGGCATC ATCGGCCTCG CCGACGGATC GACCGGATTC
GACCAGCAGG CCTTCGACGA CGCCAAGGGC CTGCGCACGG ACCTGACCGA CCTGACCGAG
GGCACCGATC TGCGCGCGCA GACGACCGGC TCGGTGCCGC AGGGCCTGGA CTCCCAGGAG
TCCGGTGACC GGGCCCTCGC GATCGTCGCT ATCGCGACGG TCGTGCTGAT CGTCGTCCTC
CTTGCCCTGA TCTTCCGCAG CGTGATCATC TGCCTGATGC CGGTGGTCGT GGTGACCGTC
GTGTCGATGG TCGCGACCGG CCTGATCGGG TGGGCCAACG AGATCTTCGA CCTCAAGGCA
GACTCGTCGA TCCAGACGAT CCTCGTCGTG GTGCTCTACG GCATCGGCAC CGACTACATC
CTGTTCTTCC TGTTCCGCTA CCGCGAGCGG CTGCGCCAGG GCGAGGACAC CCGGGCCTCG
GTGGTGCACG CGCTCGAGCG CGCCGGAGAG GCGATCGCCT CTGCCGGCGG CGCGGTCATC
GTGGCCTTCC TCGCGCTGCT GTTGAGCTCG CTGGGCATCT TCCAGGCCAT CGGCCCGGCG
CTCGCGATCG CGGTGGCGGT CACGCTGCTG GCGGCGCTCA CGCTCGTGCC CGCGGTCGTG
ACCGTGCTCG GCCGGGCGCT GTTCTGGCCC TCGAAGAAGT GGCGCGAGGA GCCGAAGAGC
GCCCGCTTCG CGCGGATCGG TGACTCGCTC GGCCACCGCC CCGGCACCTT CGCGGGAGTC
GCGGGAGCCG CGCTCGCCGT ACTCGCCGTG TTCGCGTTCA GCTTCAACCC GTCCTTCGAC
TTCAACTCCA GCCTCCCCGA CGACGTCGAG TCGACGAAGG GCCTCGAGAC GTTCCAGGAG
CACTTCGCCG CCGGCGCCAG CGAGCCGGTG CCGGTGATCC TCCGGGCCGA CGACGGCGCG
CTCGACGAAG GCGGTCTGGA GGCGTTCGGG GCCGCACTCG GGAAGGCCGA GGGCGTGGCG
CAGGTCTACC CCGCCCAGCT GTCCGAGGAC GGCACGGCCG CCCAGTTCAG CGTCGTGCTC
GACAGCGACC CGGCCTCAGA CCAGGCCCTC GACGACGTCA AGGGACCGGT CCGCGATGCC
GCCCACGAGG CGGCACCCGA CGGCACCGAG GCGTTCGTGG GCGGTACGCC GGGCATCTTC
GCCGACCTGC AGTCGGCGAT GATCCGCGAC TACAAGGTCG TGTTCCCGGT CGCCGCGCTC
GTGATCATGC TGATCCTCGC GCTGCTGCTG CGCAGCCTGG TCGCACCGTG GTACCTGATG
GCGGCGGTGG GCCTGAGCTT CGCCGCCACC CTGGGTGCGA CCGTCATCGC GTTCCAGGGC
ATCGGTGGTG ACGACGGGCT GATCTTCATG CTGCCGATCT ACATCTACCT GTTCGTCACG
GCCCTGGGCA CCGACTACAA CATCTTGATG ATCGCCCGGT TGCGCGAGGA GGCCCGGGAG
GGCCGGAGCC CACGCGCCGC GGCCGCCGAG GCGCTCAAGC ACGCCGGCCC GACGATCGCG
GCGGCCGGCG TGATCCTGGC CGGCACGTTC GCCTCGCTGA TGCTCAGCGG CAACAGCCTG
ATGATGTCGA TGGGCTTCGC GCTGTCCTTC GGCATCTTCA TCGCGGCGTT CGTGATGGCG
ATGTTCTTCA CTCCCGCACT CACCGCGCTG ATCGGGCACG CCGCCTGGTG GCCGGGCCAC
GGGGACCGGG AGGAGCCCCA TGAGCTGTCC GAGGTCCCCG CCGCCGCGGA TACTCCCTGA
|
|---|
| Protein sequence | MFAALGRLVS RRPWLVIAAW VVLAVAVISL APALETTQQE EEFLPDHYES VQAFKIQDEE
FPGATTPAAL IVFERTDGAA LTEDDQAEVG RIAEELGPEL GEKTFVQQVV TAGPDGKPNV
SEDGQVQIGI IGLADGSTGF DQQAFDDAKG LRTDLTDLTE GTDLRAQTTG SVPQGLDSQE
SGDRALAIVA IATVVLIVVL LALIFRSVII CLMPVVVVTV VSMVATGLIG WANEIFDLKA
DSSIQTILVV VLYGIGTDYI LFFLFRYRER LRQGEDTRAS VVHALERAGE AIASAGGAVI
VAFLALLLSS LGIFQAIGPA LAIAVAVTLL AALTLVPAVV TVLGRALFWP SKKWREEPKS
ARFARIGDSL GHRPGTFAGV AGAALAVLAV FAFSFNPSFD FNSSLPDDVE STKGLETFQE
HFAAGASEPV PVILRADDGA LDEGGLEAFG AALGKAEGVA QVYPAQLSED GTAAQFSVVL
DSDPASDQAL DDVKGPVRDA AHEAAPDGTE AFVGGTPGIF ADLQSAMIRD YKVVFPVAAL
VIMLILALLL RSLVAPWYLM AAVGLSFAAT LGATVIAFQG IGGDDGLIFM LPIYIYLFVT
ALGTDYNILM IARLREEARE GRSPRAAAAE ALKHAGPTIA AAGVILAGTF ASLMLSGNSL
MMSMGFALSF GIFIAAFVMA MFFTPALTAL IGHAAWWPGH GDREEPHELS EVPAAADTP
|
|---|
| |