Gene Noca_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3650 
Symbol 
ID4595762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3874935 
End bp3875558 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID639778258 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_924837 
Protein GI119717872 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.335819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGC CGGGCCCGGC GCGGGTCGAC CACGCGGTGT CCTCCGGAAC GTTCAGCCTC 
GACGGGGAGA CGTTCGAGGT CGAGAACAAC ATCTGGGTCG TGGGCGACGA CGCCGAGTGC 
GTCGTGATCG ACGCGCCGCA CGACGTCGCC GACATCCTGG CCGTCGTGGG GGACCGGAAG 
GTGAAGGCGA TCGTGTGCAC GCACGCGCAT GACGACCACG TCCGGGTCGC TCCGGCGCTG 
CGGGAGGAGG TCGTGGCGCC GATCATGCTG CACCCGGCCG ACCGCCCGCT GTGGGAGCTC 
ACGCACACCC GCTACCTCTG GGACCTCGAC CTCGAGGACG GCCTGGAGAT CGAGGTCGGT 
GGCACCAGCC TGCGGGTGCT GCACACCCCC GGGCACGCGC CGGGCGCGGT CTGCCTGTAC 
GCCTCGGACC TGGGCTGCGT CTTCACCGGG GACACCCTGT TCCAGGGTGG TCCCGGGGCC 
ACTGGACGGT CGTTCTCCGA CGCCGACCTG ATCGTGGAGT CGATCCGGAC GACGCTGTTC 
GCGCTGCCCG ACGACACGGT CGTCCACACC GGTCACGGCG CGGACACCAC GATCGGCGCC 
GAACGGGTGG GACTCGGGTC CTGA
 
Protein sequence
MAGPGPARVD HAVSSGTFSL DGETFEVENN IWVVGDDAEC VVIDAPHDVA DILAVVGDRK 
VKAIVCTHAH DDHVRVAPAL REEVVAPIML HPADRPLWEL THTRYLWDLD LEDGLEIEVG 
GTSLRVLHTP GHAPGAVCLY ASDLGCVFTG DTLFQGGPGA TGRSFSDADL IVESIRTTLF 
ALPDDTVVHT GHGADTTIGA ERVGLGS