| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3618 |
|---|
| Symbol | |
|---|
| ID | 4599421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3834830 |
|---|
| End bp | 3836968 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639778226 |
|---|
| Product | MMPL domain-containing protein |
|---|
| Protein accession | YP_924805 |
|---|
| Protein GI | 119717840 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR00833] Transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGTC AGATCGCAGG CAAGCTCACC GGCCGCGTCA GCAAGTGGCT CGTACTCATC
GCGGTCCTCG TGATCGCCGG CATCATGGGC TCCTTCGCGG GCAAGCTCAC CGACGTCCAG
AACAACGAGA CCGAGTCCTG GCTCCCGTCC AGCGCCGAGT CCACCAAGGG CTTCGAGAAG
CTCACCGCCT TCCAGGACGA GTACGACGTC GGCACCACGG TCGTCTACCA CCGCGAGGGC
GGGCTCACCC AGGCCGACCT GACCGCGATC GAGGGACAGG CCGCCGAGAT CGAGCAGATC
AAGGGCATCA CGGACGTCGT GACGCCGCAG CGGGCCGAGG CGGCCGGCAT CCCCGCGCCG
TTCGTCTCCG ACGACGGCCA GGTCGCCAAG CTGCAGTTCA CCGTCAACTA CGGCGACAAG
CTCTGGGAGG AGCTGCCCGA CCTCAAGGAC CGGCTCGACG CGATCACCGC GATCGACGGC
GTCGACACCT ACCTCGCCGG CGCCGGCGGG CAGAGCGCCG ACGCGGCCAC GATCTTCAGC
TCCTTCGACA GCAAGCTGCT GCTGGTCACC CTCGGAGTTG TGGTCCTGAT CCTGCTGGTC
AGCTACCGCA GCCCGCTGCT GTGGGCGCTC CCGATCATCA GCGCGGGCGT CGGGCTGATG
ACGACCATGG GCCTGCTGTA CTTCCTCGCC AAGTACGCCG GCCTGACCGT CAACGGCCAG
ACCCAGTTCA TCCTGACGGT GCTCGTGATC GGTGCCGGCA CCGACTACGC CCTCCTCCTG
GTCGCCCGCT ACCGCGAGGA GCTGCGCCGC CACGAGGACC GGCACGAGGC GATGGCGTTC
GCGCTGCACC GCGCCGCCCC CGCGATCCTG GCCAGCGCCG CGACCGTCGT CGTCGGGCTG
CTCTGCCTGA CCTTCGCCGA GCTGAACTCC ACGGCCGGCA TGGGCCCGGC CAACGCGATC
GGCATTGCCA TCACGTTCGT GGTGATGGTG ACCCTGCTCC CGGCGCTGCT GGTGATCTGC
GGCCGGTGGG TCTTCTGGCC GCTGGTCCCG CGCTACGGCT CCCAGGAGCC CACGGCCTCC
GGACTCTGGG CCCGCGTCGG CAAGGGCATC GCGCCGCGCC CGCGGACCGT CTGGGTCGGC
ACGGCCATCG TCCTCGGCGT GCTGTGCCTG GGCTTCCTCC GGCTCGACAC CTCCGGCATC
CCCAGCGACG AGCAGTACAC CACCCAGCAG GACTCCGTCA CCGGCCAGTC GATCCTCGTC
GACCACGGCC TGGTCGACGC CAGCACGCCC GTCCAGGTGG TCGCCAACGA GGACAAGGCC
GAGGACGTCG CCGCGGCGAT GTCGAAGGTC GACGGGATCG CCGACCCCGT GGTCGTCGCC
GCCAAGGACG GCGTGGCCCT GGTCGTCGCG GAGCTGACCA GCGACCCGTA CTCGCAGGCG
GCGTACGACG CCGTCGAGGA CGTGCGATCG GCGACCCACG ACGTGGCGGG CGCGGACGCG
CTGACCACCG GCATGACGGC GGTCTCGCTC GACATCGAGG AGGCGGCGGC GCGCGACAAC
CTGGTGATCA TCCCGATCGT CCTGCTCGCC GTGCTGCTGA TCCTGATCGG GCTGCTGCGC
TCGCTGGTCT CGCCGCTGAT CCTGGTCGGG ACGGTGATCC TGTCCTTCGG GGCCGCGCTG
GGCATCTCCG GGCTGGTGTT CGACTTCATC TACGGTTACG AGAACACCGA CACCGGATAT
CCGCTGTTCA GCTTCGTGTT CCTCGTCGCC CTCGGCATCG ACTACAACAT CTTCCTGATG
ACCCGGGTCC GCGAGGAGAC GGCCGTCCAG GGCACCCGCA GGGGATCGCT GATCGCGCTG
TCCTCCACGG GCGGGGTGAT CACGTCCGCC GGCATCGTGC TGGCCGCGAC GTTCGGGATG
CTCGCGACCA TGCCGATGAC GTTCACCCTC CAGCTCGGTA CGACGATCGC GCTCGGCGTG
CTGCTGGACA CGATGATCGT CCGCTCGGTG CTGGTCACCG CGGTCAACCT CGACCTGGGC
GGGAAGATCT GGTGGCCGAG CGCGCTGGAC CGCAAGCCGC CGGTCGAGTT CACCCCCGAG
GAGCCGACGC CCGAGCCCGA GGCGCTGCCG GTCGGCTGA
|
|---|
| Protein sequence | MHRQIAGKLT GRVSKWLVLI AVLVIAGIMG SFAGKLTDVQ NNETESWLPS SAESTKGFEK
LTAFQDEYDV GTTVVYHREG GLTQADLTAI EGQAAEIEQI KGITDVVTPQ RAEAAGIPAP
FVSDDGQVAK LQFTVNYGDK LWEELPDLKD RLDAITAIDG VDTYLAGAGG QSADAATIFS
SFDSKLLLVT LGVVVLILLV SYRSPLLWAL PIISAGVGLM TTMGLLYFLA KYAGLTVNGQ
TQFILTVLVI GAGTDYALLL VARYREELRR HEDRHEAMAF ALHRAAPAIL ASAATVVVGL
LCLTFAELNS TAGMGPANAI GIAITFVVMV TLLPALLVIC GRWVFWPLVP RYGSQEPTAS
GLWARVGKGI APRPRTVWVG TAIVLGVLCL GFLRLDTSGI PSDEQYTTQQ DSVTGQSILV
DHGLVDASTP VQVVANEDKA EDVAAAMSKV DGIADPVVVA AKDGVALVVA ELTSDPYSQA
AYDAVEDVRS ATHDVAGADA LTTGMTAVSL DIEEAAARDN LVIIPIVLLA VLLILIGLLR
SLVSPLILVG TVILSFGAAL GISGLVFDFI YGYENTDTGY PLFSFVFLVA LGIDYNIFLM
TRVREETAVQ GTRRGSLIAL SSTGGVITSA GIVLAATFGM LATMPMTFTL QLGTTIALGV
LLDTMIVRSV LVTAVNLDLG GKIWWPSALD RKPPVEFTPE EPTPEPEALP VG
|
|---|
| |