Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3522 |
Symbol | |
ID | 4595704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3733955 |
End bp | 3734623 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639778130 |
Product | TetR family transcriptional regulator |
Protein accession | YP_924709 |
Protein GI | 119717744 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.239967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCCGCCT CCACCGCCTC CCCCGCGACC GGCGCCTCCG CCGAGACGCG TCGACGGCTG GTCGAGGCGG CCACGGAGGC GTTCGCGGAG CACGGCGTGT TCACAGCGTC CCTCGTCGAC ATCACCCGGC GCGCCGGGCA GCGCAATCGG GGCGCGGTGC ACTATCACTT CGGCTCCCGC GACGGCCTGA TCGTCGCGGT CGTCGACCAG CACGCGGCCT TCCTCGCCCG ACGCGAGGGC GAGCTCCTGG AGCTCGCCCG CAACCGCCCC GACGACGACC TGACCGCGGT CGTGGAGGCG ATCGTGCGGC CGGCCGTCGA GCTCTCCGAG ACCGGCACGG ACGGCCGCCG CTACCTGGTG ATCATCGGCC AGCTCGTCGA GGAGTACGAC CGGGTGCACC CCGACGTGGC CGCCGCGCTC GAGCGCACCG GCGGCGTGCC CGTCTACGCG CTGCTGGCGG CGCGGCTGCC GGCGTACGAC GAGGCGCTGC TCAACGAGCG GATGGCGCTG GTCACCAGCT TCATCCTGCG CTCGGTCGCC GACCGCGCCC GGGCCCAGGA GGGCGCCACG CCCGGCCGGG CCCAGCTGCC GACCGAGCGG TTCGTGACGA ACCTGGTGGC GATGGCCGTG GGGATGGCGA CCGCGCCGCT GCCGAGCGGT GACGGCTAG
|
Protein sequence | MSASTASPAT GASAETRRRL VEAATEAFAE HGVFTASLVD ITRRAGQRNR GAVHYHFGSR DGLIVAVVDQ HAAFLARREG ELLELARNRP DDDLTAVVEA IVRPAVELSE TGTDGRRYLV IIGQLVEEYD RVHPDVAAAL ERTGGVPVYA LLAARLPAYD EALLNERMAL VTSFILRSVA DRARAQEGAT PGRAQLPTER FVTNLVAMAV GMATAPLPSG DG
|
| |