Gene Noca_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3505 
Symbol 
ID4595604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3713345 
End bp3713923 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID639778113 
ProductGtrA family protein 
Protein accessionYP_924692 
Protein GI119717727 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.467661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGGCC GGTGGGAACG CGTCTTCACC GAGGCGTACC GGTTCCTCGC TGTGGGCGGC 
ATCGCGACGA TCGTCGCGTT CGTGATCTTC AACTTCCTGG TGCACGGGTT CAACACCGAG 
CACCAGGCGC TGCTCGACGG CCAGCCTTAC CTCGGCTACG TCATCGCCAA CACGGTCGGC 
ATGACGATCA GCTACCGCGG CAGCCGCACC TGGGTGTTCA AGCACCGGCC GCCCCGCTCG 
GCCGACGGCG GCCGCACGGC GTTCATCGCG ATCAACGTCG TCACGATGCT GCTCCCCATC 
GCGTGCCTGT GGCTGAGCCG CGACGTGCTC GGCCTCGACG ACCCCTGGTC GGACAACATC 
TCGGCGAACG TGATCGGCCT GTTCTTCGGC CTCGTGGCGC GCTTCTACCT GTTCCGCACC 
CTGGTCTTCA AGCGGCCCGT GCACCTGCCG GACCTGATGC ACAACCCGCT CCAGGTCTTC 
GAGCTCAACG AGCTCGCCGA CCCCGACGTG GCGCCCGTGG TGCTCACCGA CTCCACAGAT 
CCGTCCAGGA GTGACCCAGC TCGGCGACCA GGTCCCTGA
 
Protein sequence
MGGRWERVFT EAYRFLAVGG IATIVAFVIF NFLVHGFNTE HQALLDGQPY LGYVIANTVG 
MTISYRGSRT WVFKHRPPRS ADGGRTAFIA INVVTMLLPI ACLWLSRDVL GLDDPWSDNI 
SANVIGLFFG LVARFYLFRT LVFKRPVHLP DLMHNPLQVF ELNELADPDV APVVLTDSTD 
PSRSDPARRP GP