Gene Noca_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3453 
Symbol 
ID4597269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3662369 
End bp3663079 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content76% 
IMG OID639778059 
Producthypothetical protein 
Protein accessionYP_924640 
Protein GI119717675 
COG category[S] Function unknown 
COG ID[COG5011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.454746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGACC AGCCCGAGCA GCAAGCCCCA CCCGTCCAGC GGCTGCGGAT CCGCTACGCC 
AAGCGCGGCC GGCTCCGGTT CACCAGCCAC CGCGACTTCA GCCGGGCCTT CGAGCGGGCG 
GTCTTCCGCG CGCGGGTCCC GATGGCCTAC TCCTCGGGGT TCAACCCGCA CCCGCGGATC 
TCGTACGCCG GCGCTGCGCC CACCGGGTCC GCGAGCGAGG CCGAGTACCT CGAGATCGGG 
CTGGCCGAGG TCCGCGACCC CGCAACCGTG CGCGCCGCCC TGGAGGAGGC GCTGCCCGAC 
GGCCTCGACG TCGTCGAGGT GGTGGAAGCC GCCGGGGGCT CCCTCGCGGA CCTCCTGGAG 
GCGAGCCACT GGCTGCTCGA CCTCGAGGTC GCTCCGGAGG TCACCGGCCC GGCTGTCACG 
ACCTTCCTTG CGGCGGAGGC CGTGCCGGTG CAGCGGATGA CCAAGAAGGG GCTGCGCGAC 
TTCGACTGCC GCGCGGCCGT GATCGCGCTC GCCGCGGAGC CGCACGGGAC CGGCACCCGC 
CTCGACCTGG TGCTCCGGCA CGGCGTCCCG TCGGTGCGCC CGGACGACGT GCTGGCCGGA 
CTGACCGCGG TCTCCGGCCT CGAGATGCCC GGCGCCCCGC TGCTCACCCG GCTCGCCCAG 
GGCCCGCTCG ACCCCACCAC CGGAGAGATC GGCGACCCGC TGGGCGGCTG A
 
Protein sequence
MRDQPEQQAP PVQRLRIRYA KRGRLRFTSH RDFSRAFERA VFRARVPMAY SSGFNPHPRI 
SYAGAAPTGS ASEAEYLEIG LAEVRDPATV RAALEEALPD GLDVVEVVEA AGGSLADLLE 
ASHWLLDLEV APEVTGPAVT TFLAAEAVPV QRMTKKGLRD FDCRAAVIAL AAEPHGTGTR 
LDLVLRHGVP SVRPDDVLAG LTAVSGLEMP GAPLLTRLAQ GPLDPTTGEI GDPLGG